File: StaticLinkExamples.html

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igv 2.6.3%2Bdfsg-3
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"
        "http://www.w3.org/TR/html4/loose.dtd">
<html>
<head>
    <script type="text/javascript" src="webstart.js"></script>
    <title></title>
</head>
<body>
<p>
    <a href="http://www.broadinstitute.org/igv/projects/current/launch.php?sessionURL=http://www.broadinstitute.org/igvdata/encode/hg19/broadEncode/wgEncodeBroadHistoneGm12878ControlStdSig.bigWig&amp;genome=hg19&amp;name=Gm12878">
        Launch link with name</a></p>
<p>
    <a href="http://www.broadinstitute.org/igv/projects/current/launch.php?sessionURL=http://www.broadinstitute.org/igvdata/encode/hg19/broadEncode/wgEncodeBroadHistoneGm12878ControlStdSig.bigWig&amp;genome=hg19&amp;name=Gm12878&amp;merge=false">
        Launch link with name, merge = false</a></p>
<p>
    <a href="http://localhost:60151/load?file=http://www.broadinstitute.org/igvdata/annotations/hg18/conservation/pi.12mer.wig.tdf&amp;locus=egfr&amp;name=CONS">
        Direct load with name</a></p>
<p>
    <a href="http://localhost:60151/load?file=http://www.broadinstitute.org/igvdata/annotations/hg18/conservation/pi.12mer.wig.tdf&amp;locus=egfr&amp;name=CONS&amp;merge=false">
        Direct load with name, merge = false</a></p>
<p>
    <a href="http://localhost:60151/load?file=http://www.broadinstitute.org/igvdata/annotations/hg18/conservation/pi.12mer.wig.tdf&amp;locus=egfr&amp;name=CONS&amp;merge=true">
        Direct load with name, merge = true</a></p>
<p>
    <a href="http://localhost:60151/load?file=http://www.broadinstitute.org/igvdata/annotations/hg18/conservation/pi.12mer.wig.tdf">
        Direct load no name</a></p>
<p><a href="http://localhost:60151/load?genome=http://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/hg18/hg18.fasta">
    Load fasta</a></p>
<p>
    <a href="http://localhost:60151/load?file=http://www.broadinstitute.org/igvdata/annotations/hg18/conservation/pi.12mer.wig.tdf&amp;genome=http://s3.amazonaws.com/igv.broadinstitute.org/genomes/seq/hg18/hg18.fasta">
        Direct load with fasta, merge=true</a></p>

<p>
    <a href="http://localhost:60151/load?file=gs%3A//igv-bam-test/NA12878_S1.bam&amp;index=gs%3A//igv-bam-test/NA12878_S1.bam.bai">
        GS bam with index
    </a>

</p>


<p><a href="http://localhost:60151/execute?command=sort+yourTack">
    Batch sort</a></p>

</body>
</html>