File: Tools.java

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package ij.util;
import java.awt.Color;
import java.util.*;
import java.io.*;

/** This class contains static utility methods. */
 public class Tools {
	/** This array contains the 16 hex digits '0'-'F'. */
	public static final char[] hexDigits = {'0','1','2','3','4','5','6','7','8','9','A','B','C','D','E','F'};
	
	/** Converts a Color to an 7 byte hex string starting with '#'. */
	public static String c2hex(Color c) {
		int i = c.getRGB();
		char[] buf7 = new char[7];
		buf7[0] = '#';
		for (int pos=6; pos>=1; pos--) {
			buf7[pos] = hexDigits[i&0xf];
			i >>>= 4;
		}
		return new String(buf7);
	}
		
	/** Converts a float to an 9 byte hex string starting with '#'. */
	public static String f2hex(float f) {
		int i = Float.floatToIntBits(f);
		char[] buf9 = new char[9];
		buf9[0] = '#';
		for (int pos=8; pos>=1; pos--) {
			buf9[pos] = hexDigits[i&0xf];
			i >>>= 4;
		}
		return new String(buf9);
	}
		
	public static double[] getMinMax(double[] a) {
		double min = Double.MAX_VALUE;
		double max = -Double.MAX_VALUE;
		double value;
		for (int i=0; i<a.length; i++) {
			value = a[i];
			if (value<min)
				min = value;
			if (value>max)
				max = value;
		}
		double[] minAndMax = new double[2];
		minAndMax[0] = min;
		minAndMax[1] = max;
		return minAndMax;
	}

	public static double[] getMinMax(float[] a) {
		double min = Double.MAX_VALUE;
		double max = -Double.MAX_VALUE;
		double value;
		for (int i=0; i<a.length; i++) {
			value = a[i];
			if (value<min)
				min = value;
			if (value>max)
				max = value;
		}
		double[] minAndMax = new double[2];
		minAndMax[0] = min;
		minAndMax[1] = max;
		return minAndMax;
	}
	
	/** Converts the float array 'a' to a double array. */
	public static double[] toDouble(float[] a) {
		int len = a.length;
		double[] d = new double[len];
		for (int i=0; i<len; i++)
			d[i] = a[i];
		return d;
	}
	
	/** Converts the double array 'a' to a float array. */
	public static float[] toFloat(double[] a) {
		int len = a.length;
		float[] f = new float[len];
		for (int i=0; i<len; i++)
			f[i] = (float)a[i];
		return f;
	}
	
	/** Converts carriage returns to line feeds. */
	public static String fixNewLines(String s) {
		char[] chars = s.toCharArray();
		for (int i=0; i<chars.length; i++)
			{if (chars[i]=='\r') chars[i] = '\n';}
		return new String(chars);
	}

	/**
	* Returns a double containg the value represented by the 
	* specified <code>String</code>.
	*
	* @param      s   the string to be parsed.
	* @param      defaultValue   the value returned if <code>s</code>
	*	does not contain a parsable double
	* @return     The double value represented by the string argument or
	*	<code>defaultValue</code> if the string does not contain a parsable double
	*/
	public static double parseDouble(String s, double defaultValue) {
		if (s==null) return defaultValue;
		try {
			defaultValue = Double.parseDouble(s);
		} catch (NumberFormatException e) {}
		return defaultValue;			
	}

	/**
	* Returns a double containg the value represented by the 
	* specified <code>String</code>.
	*
	* @param      s   the string to be parsed.
	* @return     The double value represented by the string argument or
	*	Double.NaN if the string does not contain a parsable double
	*/
	public static double parseDouble(String s) {
		return parseDouble(s, Double.NaN);
	}
	
	/** Returns the number of decimal places need to display two numbers. */
	public static int getDecimalPlaces(double n1, double n2) {
		if (Math.round(n1)==n1 && Math.round(n2)==n2)
			return 0;
		else {
			n1 = Math.abs(n1);
			n2 = Math.abs(n2);
		    double n = n1<n2&&n1>0.0?n1:n2;
		    double diff = Math.abs(n2-n1);
		    if (diff>0.0 && diff<n) n = diff;		    
			int digits = 2;
			if (n<100.0) digits = 3;
			if (n<0.1) digits = 4;
			if (n<0.01) digits = 5;
			if (n<0.001) digits = 6;
			if (n<0.0001) digits = 7;
			return digits;
		}
	}
	
	/** Splits a string into substrings using the default delimiter set, 
	which is " \t\n\r" (space, tab, newline and carriage-return). */
	public static String[] split(String str) {
		return split(str, " \t\n\r");
	}

	/** Splits a string into substring using the characters
	contained in the second argument as the delimiter set. */
	public static String[] split(String str, String delim) {
		if (delim.equals("\n"))
			return splitLines(str);
		StringTokenizer t = new StringTokenizer(str, delim);
		int tokens = t.countTokens();
		String[] strings;
		if (tokens>0) {
       		strings = new String[tokens];
        	for(int i=0; i<tokens; i++) 
        		strings[i] = t.nextToken();
        } else {
        	strings = new String[1];
        	strings[0] = str;
        	tokens = 1;
        }
		return strings;
	}
	
	static String[] splitLines(String str) {
		Vector v = new Vector();
        try {
            BufferedReader br  = new BufferedReader(new StringReader(str));
            String line;
            while (true) {
                line = br.readLine();
                if (line == null) break;
                v.addElement(line);
            }
            br.close();
        } catch(Exception e) { }
		String[] lines = new String[v.size()];
		v.copyInto((String[])lines);
		return lines;
	}
	
	//Modified from: http://stackoverflow.com/questions/951848  N.Vischer
	// quicksort a[left] to a[right]
	public static void quicksort(double[] a, int[] index) {
		quicksort(a, index, 0, a.length-1);
	}

	public static void quicksort(double[] a, int[] index, int left, int right) {
		if (right <= left) return;
		int i = partition(a, index, left, right);
		quicksort(a, index, left, i-1);
		quicksort(a, index, i+1, right);
	}

	// partition a[left] to a[right], assumes left < right
	private static int partition(double[] a, int[] index,
		int left, int right) {
		int i = left - 1;
		int j = right;
		while (true) {
			while (a[++i] < a[right])      // find item on left to swap
				;                               // a[right] acts as sentinel
			while (!(a[right] >= a[--j]))   // find item on right to swap (NAN TRICK)
				if (j == left) break;           // don't go out-of-bounds
			if (i >= j) break;                  // check if pointers cross
			exch(a, index, i, j);               // swap two elements into place
		}
		exch(a, index, i, right);               // swap with partition element
		return i;
	}

	// exchange a[i] and a[j]
	private static void exch(double[] a, int[] index, int i, int j) {
		double swap = a[i];
		a[i] = a[j];
		a[j] = swap;
		int b = index[i];
		index[i] = index[j];
		index[j] = b;
	}

	// quicksort a[left] to a[right]
	public static void quicksort(String[] a, int[] index) {
		quicksort(a, index, 0, a.length-1);
	}

	public static void quicksort(String[] a, int[] index, int left, int right) {
		if (right <= left) return;
		int i = partition(a, index, left, right);
		quicksort(a, index, left, i-1);
		quicksort(a, index, i+1, right);
	}

	// partition a[left] to a[right], assumes left < right
	private static int partition(String[] a, int[] index,
		int left, int right) {
		int i = left - 1;
		int j = right;
		while (true) {
			while (a[++i].compareToIgnoreCase( a[right])<0)      // find item on left to swap
			;                               // a[right] acts as sentinel
			while (a[right].compareToIgnoreCase( a[--j])<0)      // find item on right to swap
			if (j == left) break;           // don't go out-of-bounds
			if (i >= j) break;                  // check if pointers cross
			exch(a, index, i, j);               // swap two elements into place
		}
		exch(a, index, i, right);               // swap with partition element
		return i;
	}
	
	// exchange a[i] and a[j]
	private static void exch(String[] a, int[] index, int i, int j) {
		String swap = a[i];
		a[i] = a[j];
		a[j] = swap;
		int b = index[i];
		index[i] = index[j];
		index[j] = b;
	}

}