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// This macro implements the Image>HyperStacks>New HyperStack command.
defaults = "8-bit Color 300 200 3 10 5 1";
if (is("applet"))
prefs = split(defaults);
else
prefs = split(call("ij.Prefs.get", "hyperstack.new", defaults));
if(prefs.length<8) prefs = split(defaults);
type = prefs[0];
mode = prefs[1];
width = parseInt(prefs[2]);
height = parseInt(prefs[3]);
c = parseInt(prefs[4]);
z = parseInt(prefs[5]);
t = parseInt(prefs[6]);
label = parseInt(prefs[7]);
title = "HyperStack";
Dialog.create("HyperStack");
Dialog.addString("Title:", title);
Dialog.addChoice("Type:", newArray("8-bit", "16-bit", "32-bit", "RGB"), type);
Dialog.addChoice("Display Mode:", newArray("Composite", "Color", "Grayscale"), mode);
Dialog.addNumber("Width:", width);
Dialog.addNumber("Height:", height);
Dialog.addNumber("Channels (c):", c);
Dialog.addNumber("Slices (z):", z);
Dialog.addNumber("Frames (t):", t);
Dialog.addCheckbox("Label Images", label);
Dialog.show;
title = Dialog.getString();
type = Dialog.getChoice();
mode = Dialog.getChoice();
width = Dialog.getNumber;
height = Dialog.getNumber;
c = Dialog.getNumber;
z = Dialog.getNumber;
t = Dialog.getNumber;
label = Dialog.getCheckbox;
batch = is("Batch Mode");
if (!batch) setBatchMode(true);
if (label)
type2 = type + " ramp";
else
type2 = type + " black";
newImage(title, type2, width, height, c*z*t);
run("Properties...", "channels="+c+" slices="+z+" frames="+t);
showStatus("");
channel=1; slice=1; frame=1;
setFont("SansSerif", 24);
if (label) {
yloc = 30;
for (i=1; i<=nSlices; i++) {
showProgress(i, nSlices);
setSlice(i);
setColor(0, 0, 0);
fillRect(0, 0, width, yloc);
fillRect(0, yloc+15, width, height-(yloc+15));
setColor(255, 255, 255);
drawString("c="+pad(channel)+", z="+pad(slice)+", t="+pad(frame), 5, yloc);
//setMetadata("slice", "c="+pad(channel)+", z="+pad(slice)+", t="+pad(frame));
if (i<=c) {
setFont("SansSerif", 12, "antialiased");
msg = "Press shift-z (Image>HyperStacks>Channels)\n"+
"to open the \"Channels\" window, which will\n"+
"allow you switch to composite color mode\n"+
"and to enable/disable channels.\n";
drawString(msg, 25, 80);
setFont("SansSerif", 24);
}
channel++;
if (channel>c) {
channel = 1;
slice++;
if (slice>z) {
slice = 1;
frame++;
if (frame>t) frame = 1;
}
}
}
}
setSlice(1);
if (c>1 && bitDepth!=24)
run("Make Composite", "display="+mode);
setOption("OpenAsHyperStack", true);
if (!batch) setBatchMode(false);
prefs = type+" "+mode+" "+width+" "+height+" "+c+" "+z+" "+t+" "+label;
if (!is("applet"))
call("ij.Prefs.set", "hyperstack.new", prefs);
exit;
function pad(n) {
str = toString(n);
while (lengthOf(str)<3)
str = "0" + str;
return str;
}
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