File: RoiRotator.java

package info (click to toggle)
imagej 1.52j-1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 5,604 kB
  • sloc: java: 120,017; sh: 279; xml: 161; makefile: 6
file content (128 lines) | stat: -rw-r--r-- 4,032 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
package ij.plugin;
import ij.*;
import ij.process.*;
import ij.gui.*;
import java.awt.*;
import java.awt.geom.*;

/** This plugin implements the Edit/Selection/Rotate command. */
public class RoiRotator implements PlugIn {
	private static double defaultAngle = 15;
	private static boolean rotateAroundImageCenter;

	public void run(String arg) {
		ImagePlus imp = IJ.getImage();
		Roi roi = imp.getRoi();
		if (roi==null) {
			IJ.error("Rotate", "This command requires a selection");
			return;
		}
		double angle = showDialog(defaultAngle);
		if (Double.isNaN(angle))
			return;
		if (!IJ.macroRunning())
			defaultAngle = angle;
		FloatPolygon center = roi.getRotationCenter();
		double xcenter = center.xpoints[0];
		double ycenter = center.ypoints[0];
		if (rotateAroundImageCenter) {
			xcenter = imp.getWidth()/2.0;
			ycenter = imp.getHeight()/2.0;
		}
		Roi roi2 = rotate(roi, angle, xcenter, ycenter);
		if (roi2==null && (roi instanceof ImageRoi))
			return;
		if (!rotateAroundImageCenter)
			roi2.setRotationCenter(xcenter,ycenter);
		Undo.setup(Undo.ROI, imp);
		roi = (Roi)roi.clone();
		imp.setRoi(roi2);
		Roi.previousRoi = roi;
	}
	
	public double showDialog(double angle) {
		GenericDialog gd = new GenericDialog("Rotate Selection");
		int decimalPlaces = 0;
		if ((int)angle!=angle)
			decimalPlaces = 2;
		if (Macro.getOptions()!=null)
			rotateAroundImageCenter = false;
		gd.addNumericField("Angle:", angle, decimalPlaces, 3, "degrees");
		gd.addCheckbox("Rotate around image center", rotateAroundImageCenter);
		gd.setInsets(5, 0, 0);
		gd.addMessage("Enter negative angle to \nrotate counter-clockwise", null, Color.darkGray);
		gd.showDialog();
		if (gd.wasCanceled())
			return Double.NaN;
		rotateAroundImageCenter = gd.getNextBoolean();
		return gd.getNextNumber();
	}
	
	public static Roi rotate(Roi roi, double angle) {
		if (roi instanceof ImageRoi) {
			((ImageRoi)roi).rotate(angle);
			return roi;
		}
		FloatPolygon center = roi.getRotationCenter();
		double xcenter = center.xpoints[0];
		double ycenter = center.ypoints[0];
		Roi roi2 = rotate(roi, angle, xcenter, ycenter);
		roi2.setRotationCenter(xcenter,ycenter);
		return roi2;
	}

	public static Roi rotate(Roi roi, double angle, double xcenter, double ycenter) {
		double theta = -angle*Math.PI/180.0;
		if (roi instanceof ShapeRoi)
			return rotateShape((ShapeRoi)roi, -theta, xcenter, ycenter);
		FloatPolygon poly = roi.getFloatPolygon();
		int type = roi.getType();
		if (type==Roi.LINE) {
			Line line = (Line)roi;
			double x1=line.x1d;
			double y1=line.y1d;
			double x2=line.x2d;
			double y2=line.y2d;
			poly = new FloatPolygon();
			poly.addPoint(x1, y1);
			poly.addPoint(x2, y2);
		}
		for (int i=0; i<poly.npoints; i++) {
			double dx = poly.xpoints[i]-xcenter;
			double dy = ycenter-poly.ypoints[i];
			double radius = Math.sqrt(dx*dx+dy*dy);
			double a = Math.atan2(dy, dx);
			poly.xpoints[i] = (float)(xcenter + radius*Math.cos(a+theta));
			poly.ypoints[i] = (float)(ycenter - radius*Math.sin(a+theta));
		}
		Roi roi2 = null;
		if (type==Roi.LINE)
			roi2 = new Line(poly.xpoints[0], poly.ypoints[0], poly.xpoints[1], poly.ypoints[1]);
		else if (type==Roi.POINT)
			roi2 = new PointRoi(poly.xpoints, poly.ypoints,poly.npoints);
		else {
			if (type==Roi.RECTANGLE)
				type = Roi.POLYGON;
			if (type==Roi.RECTANGLE && poly.npoints>4) // rounded rectangle
				type = Roi.FREEROI;
			if (type==Roi.OVAL||type==Roi.TRACED_ROI)
				type = Roi.FREEROI;
			roi2 = new PolygonRoi(poly.xpoints, poly.ypoints,poly.npoints, type);
		}
		roi2.setStrokeColor(roi.getStrokeColor());
		if (roi.getStroke()!=null)
			roi2.setStroke(roi.getStroke());
		return roi2;
	}
	
	private static Roi rotateShape(ShapeRoi roi, double angle, double xcenter, double ycenter) {
		Shape shape = roi.getShape();
		AffineTransform at = new AffineTransform();
		at.rotate(angle, xcenter, ycenter);
		Rectangle r = roi.getBounds();
		at.translate(r.x, r.y);
		Shape shape2 = at.createTransformedShape(shape);
		return new ShapeRoi(shape2);
	}
	
}