File: SyncWindows.java

package info (click to toggle)
imagej 1.52j-1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 5,604 kB
  • sloc: java: 120,017; sh: 279; xml: 161; makefile: 6
file content (1196 lines) | stat: -rw-r--r-- 34,741 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
1105
1106
1107
1108
1109
1110
1111
1112
1113
1114
1115
1116
1117
1118
1119
1120
1121
1122
1123
1124
1125
1126
1127
1128
1129
1130
1131
1132
1133
1134
1135
1136
1137
1138
1139
1140
1141
1142
1143
1144
1145
1146
1147
1148
1149
1150
1151
1152
1153
1154
1155
1156
1157
1158
1159
1160
1161
1162
1163
1164
1165
1166
1167
1168
1169
1170
1171
1172
1173
1174
1175
1176
1177
1178
1179
1180
1181
1182
1183
1184
1185
1186
1187
1188
1189
1190
1191
1192
1193
1194
1195
1196
package ij.plugin.frame;
import ij.*;
import ij.gui.*;
import ij.measure.Calibration;
import java.awt.*;
import java.awt.event.*;
import java.awt.geom.*;
import java.util.*;


/** This class "synchronizes" mouse input in multiple windows. Once
	several windows are synchronized, mouse events in any one of the
	synchronized windows are propagated to the others.

	Note, the notion of synchronization use by the SyncWindows class
	here (i.e. multiple windows that all get the same mouse input) is
	somewhat different than the use of the synchronize keyword in the
	Java language. (In Java, synchronize has to do w/ critical section
	access by multiple threads.)
<p>
	Optionally passes on change of z-slice of a stack to other stacks;

	Optionally translates positions to different windows via offscreen
	coordinates, i.e. correctly translates coordinates to windows with a
	different zoom;

	Updates the list of windows by click of a button;

@author Patrick Kelly <phkelly@ucsd.edu>;
Improved GUI, support of image coordinates and z-slices by Joachim Walter <correspondence@walter-witzenhausen.de>

*/
public class SyncWindows extends PlugInFrame implements
	ActionListener, MouseMotionListener, MouseListener, DisplayChangeListener,
	ItemListener, ImageListener, CommandListener {

	/** Indices of synchronized image windows are maintained in this Vector. */
	protected Vector vwins = null;

	/* Manage mouse information.
	   The mouse coordinates x and y are only changed by the methods of the
	   MousMotionListener Interface. They are used by the MouseListener methods.
	   This way, the coordinates that were valid before a MouseListener event
	   (e.g. a Zoom) happened can be accessed. */
	protected int oldX, oldY;
	protected int x=0;
	protected int y=0;

	/** List of currently displayed windows retrieved from ImageJ
	   window manager. */
	protected java.awt.List wList;

	/** Panel for GUI */
	protected java.awt.Panel panel;

	/** Checkboxes for user control. */
	protected Checkbox cCursor, cSlice, cChannel, cFrame, cCoords, cScaling;

	/** Buttons for user control. */
	protected Button bSyncAll, bUnsyncAll;

	/** Hashtable to map list ids to image window ids. */
	protected Vector vListMap;
	
	/** reference to current instance of ImageJ (to avoid repeated IJ.getInstance() s) */
	protected final ImageJ ijInstance;

	/*	Variables to store display values of current window.
	 *	Translation by screenX/Y() and offScreenX/Y() does not work,
	 *	because current window receives events (e.g. zooming) before this plugin.
	 */
	private double currentMag = 1;
	private Rectangle currentSrcRect = new Rectangle(0,0,400,400);
	
	// Control size of cursor box and clipping region. These could be
	// changed to tune performance.
	static final int RSZ = 16;
	static final int SZ = RSZ/2;
	static final int SCALE = 3;
	
	private static SyncWindows instance;
	private static Point location;
	
	//--------------------------------------------------
	/** Create window sync frame. Frame is shown via call to show() or
		by invoking run method.	 */
	public SyncWindows() {
		this("Synchronize Windows");
	}

	public SyncWindows(String s) {
		super(s);
		ijInstance = IJ.getInstance();
		if (instance!=null) {
			WindowManager.toFront(instance);
			return;
		}
		instance = this;
		panel = controlPanel();
		add(panel);
		pack();
		setResizable(false);
		IJ.register(this.getClass());
		if (location==null)
			location = getLocation();
		else
			setLocation(location);
		updateWindowList();
		WindowManager.addWindow(this);
		ImagePlus.addImageListener(this);
		Executer.addCommandListener(this);
		show();
	}
	
	public static void setC(ImageWindow source, int channel) {
		SyncWindows syncWindows = instance;
		if (syncWindows==null || !syncWindows.synced(source))
			return;
		DisplayChangeEvent event=new DisplayChangeEvent(source, DisplayChangeEvent.CHANNEL, channel);
		syncWindows.displayChanged(event);
	}

	public static void setZ(ImageWindow source, int slice) {
		SyncWindows syncWindows = instance;
		if (syncWindows==null || !syncWindows.synced(source))
			return;
		DisplayChangeEvent event=new DisplayChangeEvent(source, DisplayChangeEvent.Z, slice);
		syncWindows.displayChanged(event);
	}

	public static void setT(ImageWindow source, int frame) {
		SyncWindows syncWindows = instance;
		if (syncWindows==null || !syncWindows.synced(source))
			return;
		DisplayChangeEvent event = new DisplayChangeEvent(source, DisplayChangeEvent.T, frame);
		syncWindows.displayChanged(event);
	}
	
	private boolean synced(ImageWindow source) {
		if (source==null || vwins==null)
			return false;
		ImagePlus imp = source.getImagePlus();
		if (imp==null)
			return false;
		return vwins.contains(new Integer(imp.getID()));
	}

	// --------------------------------------------------
	/**
	* Method to pass on changes of the z-slice of a stack.
	*/
	public void displayChanged(DisplayChangeEvent e) {
		//if (e!=null) throw new IllegalArgumentException();
		//IJ.log("displayChanged: "+e);
		if (vwins == null) return;

		Object source = e.getSource();
		int type = e.getType();
		int value = e.getValue();

		ImagePlus imp;
		ImageWindow iw;

		// Current imagewindow
		ImageWindow iwc = WindowManager.getCurrentImage().getWindow();

		// pass on only if event comes from current window
		if (!iwc.equals(source)) return;

		// Change channel in other synchronized windows.
		if (cChannel.getState() && type==DisplayChangeEvent.CHANNEL) {
			for (int n=0; n<vwins.size();++n) {
				imp = getImageFromVector(n);
				if (imp!=null) {
					iw = imp.getWindow();
					if (!iw.equals(source))
						imp.setC(value);
				}
			}	
		}		 
		
		// Change slice in other synchronized windows.
		if (cSlice.getState() && type==DisplayChangeEvent.Z) {
			for (int n=0; n<vwins.size();++n) {
				imp = getImageFromVector(n);
				if (imp!=null) {
					iw = imp.getWindow();
					if (!iw.equals(source)) {
						if (imp.getNSlices()==1 && imp.getNFrames()>1)
							imp.setT(value);
						else
							imp.setZ(value);
					}
				}
			}
		}

		// Change frame in other synchronized windows.
		if (cFrame.getState() && type==DisplayChangeEvent.T) {
			for(int n=0; n<vwins.size();++n) {
				imp = getImageFromVector(n);
				if (imp!=null) {
					iw = imp.getWindow();
					if (!iw.equals(source))
						imp.setT(value);
				}
			}   
		}

		// Store srcRect, Magnification and others of current ImageCanvas
		ImageCanvas icc = iwc.getCanvas();
		storeCanvasState(icc);
	}


	// --------------------------------------------------
	//
	// MouseMotionListener interface methods.
	//

	// --------------------------------------------------
	/** Draws the "synchronize" cursor in each of the synchronized
	 windows.  */
	public void mouseMoved(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		Point oldp;
		oldX = x; oldY = y;
		x = e.getX();
		y = e.getY();
		p = new Point(x, y);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		// Draw new cursor box in each synchronized window.
		// and pass on mouse moved event
		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);	   
			if (imp != null) {				
				iw = imp.getWindow();
				ic = iw.getCanvas();			  
				if (cCoords.getState() && iw != iwc) {
					p = getMatchingCoords(ic, icc, x, y);
					oldp = getMatchingCoords(ic, icc, oldX, oldY);
				} else {
					p.x = x;
					p.y = y;
				}

				// For PolygonRoi the cursor would overwrite the indicator lines.
				Roi roi = imp.getRoi();
				if (! (roi != null && roi instanceof PolygonRoi && roi.getState() == Roi.CONSTRUCTING) )
					drawSyncCursor(imp, p.x, p.y);
				if (iw != iwc)
					ic.mouseMoved(adaptEvent(e, ic, p));	   
			}		   
		}
		// Display correct values in ImageJ statusbar
		iwc.getImagePlus().mouseMoved(icc.offScreenX(x), icc.offScreenY(y));

		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}

	// --------------------------------------------------
	/** Propagate mouse dragged events to all synchronized windows.	 */
	public void mouseDragged(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		Point oldp;

		oldX = x; oldY = y;
		x = e.getX();
		y = e.getY();

		p = new Point(x, y);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		// Draw new cursor box in each synchronized window.
		// and pass on mouse dragged event
		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {
				iw = imp.getWindow();
				ic = iw.getCanvas();

				if (cCoords.getState() && iw != iwc) {
					p = getMatchingCoords(ic, icc, x, y);
					oldp = getMatchingCoords(ic, icc, oldX, oldY);
				} else {
					p = new Point(x, y);
				}

				// For PolygonRoi the cursor would overwrite the indicator lines.
				Roi roi = imp.getRoi();
				if (! (roi != null && roi instanceof PolygonRoi && roi.getState() == Roi.CONSTRUCTING) )
					drawSyncCursor(imp, p.x, p.y);

				if(iw != iwc)
					ic.mouseDragged(adaptEvent(e, ic, p));
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}


	// --------------------------------------------------
	//
	// MouseListener interface
	//

	// --------------------------------------------------
	/** Propagate mouse clicked events to all synchronized windows. */
	public void mouseClicked(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		// prevent popups popping up in all windows on right mouseclick
		if (Toolbar.getToolId()!= Toolbar.MAGNIFIER && 
			(e.isPopupTrigger() || (e.getModifiers() & MouseEvent.META_MASK)!=0)) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		p = new Point(x,y);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {
				iw = imp.getWindow();
				if(iw != iwc) {
					ic = iw.getCanvas();
					if (cCoords.getState()) {
						p = getMatchingCoords(ic, icc, x, y);
					}
					ic.mouseClicked(adaptEvent(e, ic, p));
				}
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}

	// --------------------------------------------------
	/** Propagate mouse entered events to all synchronized windows. */
	public void mouseEntered(MouseEvent e) {	
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		p = new Point(x,y);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {		
				iw = imp.getWindow();
				if(iw != iwc) {
					ic = iw.getCanvas();

					if (cCoords.getState()) {
						p = getMatchingCoords(ic, icc, x, y);
					}
					ic.mouseEntered(adaptEvent(e, ic, p));
				}				
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}


	// --------------------------------------------------
	/** Propagate mouse exited events to all synchronized windows. */
	public void mouseExited(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		p = new Point(x,y);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {				
				iw = imp.getWindow();
				ic = iw.getCanvas();
				
				if (cCoords.getState() && iw != iwc)
					p = getMatchingCoords(ic, icc, x, y);
				else {
					p.x = x;
					p.y = y;
				}

				setCursor(imp, null);
				if (iw != iwc)
					ic.mouseExited(adaptEvent(e, ic, p));					 
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}


	// --------------------------------------------------
	/** Propagate mouse pressed events to all synchronized windows. */
	public void mousePressed(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		// prevent popups popping up in all windows on right mouseclick
		if (Toolbar.getToolId()!= Toolbar.MAGNIFIER && 
			(e.isPopupTrigger() || (e.getModifiers() & MouseEvent.META_MASK)!=0)) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;
		Point p;
		p = new Point(x,y);

		// Current window already received mouse event.
		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {
				iw = imp.getWindow();
				ic = iw.getCanvas();
				// Repaint to get rid of sync indicator.
				ic.paint(ic.getGraphics());
				if(iw != iwc) {
					ic = iw.getCanvas();
					if (cCoords.getState()) {
						p = getMatchingCoords(ic, icc, x, y);
					}
					ic.mousePressed(adaptEvent(e, ic, p));
				}
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}

	// --------------------------------------------------
	/** Propagate mouse released events to all synchronized
		windows. */
	public void mouseReleased(MouseEvent e) {
		if (!cCursor.getState()) return;
		if (vwins == null) return;
		// prevent popups popping up in all windows on right mouseclick
		if (Toolbar.getToolId()!= Toolbar.MAGNIFIER && 
			(e.isPopupTrigger() || (e.getModifiers() & MouseEvent.META_MASK)!=0)) return;
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;

		int xloc = e.getX();
		int yloc = e.getY();
		Point p = new Point(xloc, yloc);

		// get ImageCanvas that received event
		ImageCanvas icc = (ImageCanvas) e.getSource();
		ImageWindow iwc = (ImageWindow) icc.getParent();

		for(int n=0; n<vwins.size();++n) {
			// to keep ImageJ from freezing when a mouse event is processed on exit
			if (ijInstance.quitting()) {
				return;
			}
			imp = getImageFromVector(n);
			if (imp != null) {
				iw = imp.getWindow();
				ic = iw.getCanvas();

				if (cCoords.getState())
					p = getMatchingCoords(ic, icc, xloc, yloc);

				// Redraw to make sure sync cursor is drawn.
				// For PolygonRoi the cursor would overwrite the indicator lines.
				Roi roi = imp.getRoi();
				if (! (roi != null && roi instanceof PolygonRoi && roi.getState() == Roi.CONSTRUCTING) )
					drawSyncCursor(imp, p.x, p.y);
				if(iw != iwc)
					ic.mouseReleased(adaptEvent(e, ic, p));
			}
		}
		// Store srcRect, Magnification and others of current ImageCanvas
		storeCanvasState(icc);
	}


	// --------------------------------------------------
	/** Implementation of ActionListener interface. */
	public void actionPerformed(ActionEvent e) {
		// Determine which button was pressed.
		Object source = e.getSource();
		if (source instanceof Button) {
			Button bpressed = (Button)source;

			 if(bpressed==bSyncAll) {
				if (wList == null) return;
				// Select all items on list.
				Vector v = new Vector();
				Integer I;
				for(int i=0; i<wList.getItemCount();++i) {
					wList.select(i);
					I = (Integer)vListMap.elementAt(i);
					v.addElement(I);
				}
				addWindows(v);
			}
			else if(bpressed==bUnsyncAll) {
				removeAllWindows();
			}
		} else if (wList != null && source == wList) {
			// Doubleclick on entry in wList
			addSelections();
		}
	}

	// --------------------------------------------------
	/** Item Listener method
	 */
	public void itemStateChanged(ItemEvent e) {
	// safest way to get matching of selected windows in list and in plugin:
	// deselect all windows in plugin and then select all in list
	// A List often does not do what you expect.

		if (wList != null && e.getSource() == wList) {
			if(vwins != null) {
			// unsynchronize all windows and remove from window list
				Integer I;
				for(int n = 0; n<vwins.size();++n) {
					I = (Integer)vwins.elementAt(n);
					removeWindow(I);
				}
				vwins.removeAllElements();
			}
			addSelections();
		}
		
		if (cCoords != null && e.getSource() == cCoords) {
			if (cScaling != null && e.getStateChange() == ItemEvent.DESELECTED) 
					cScaling.setState(false);
		}	
		
		if (cScaling != null && e.getSource() == cScaling) {
			if (cCoords != null && e.getStateChange() == ItemEvent.SELECTED) 
					cCoords.setState(true);
		}
	}


	// --------------------------------------------------
	/** Override parent windowClosing method to clean up synchronized
	resources on exit. */
	public void windowClosing(WindowEvent e) {
		if(e.getSource() == this) {
			removeAllWindows();
			ImagePlus.removeImageListener(this);
			Executer.removeCommandListener(this);
			close();	
		}
	}
	
	/** Implementation of ImageListener interface: update window list, if image is opened or closed */
	public void imageOpened(ImagePlus imp) {
		updateWindowList();
	}

	/** Implementation of ImageListener interface: update window list, if image is opened or closed */
	public void imageClosed(ImagePlus imp) {
		updateWindowList();
	}

	public void imageUpdated(ImagePlus imp) {
	}

	// --------------------------------------------------
	/** Build window list display and button controls.
	 *	Create Hashtable that connects list entries to window IDs.*/
	protected Panel controlPanel() {
		Panel p = new Panel();
		BorderLayout layout = new BorderLayout();
		layout.setVgap(3);
		p.setLayout(layout);
		p.add(buildWindowList(), BorderLayout.NORTH,0);
		p.add(buildControlPanel(), BorderLayout.CENTER,1);
		return p;
	}

	// --------------------------------------------------
	/** Builds list of open ImageWindows */
	protected Component buildWindowList() {
		ImagePlus img;
		ImageWindow iw;

		// get IDList from WindowManager
		int[] imageIDs = WindowManager.getIDList();		  
		
		if(imageIDs != null) {
			int size;
			if (imageIDs.length < 10) {
				size = imageIDs.length;
			} else {
				size = 10;
			} 
			
			// Initialize window list and vector that maps list entries to window IDs.
			wList = new java.awt.List(size, true);
			vListMap = new Vector();

			// Add Windows to list, select windows, that previously were selected
			for(int n=0; n<imageIDs.length;++n) {
				vListMap.addElement(new Integer(imageIDs[n]));
				wList.add(WindowManager.getImage(imageIDs[n]).getTitle());
				if ( vwins != null && vwins.contains(new Integer(imageIDs[n])) ) {
					wList.select(n);
				}
			}
			// clean vector of selected images (vwins) from images that have been closed,
			if (vwins != null && vwins.size() != 0) {
				for (int n=0; n<vwins.size(); ++n) {
					if(! vListMap.contains(vwins.elementAt(n))) {
						vwins.removeElementAt(n);
						n -= 1;
					}
				}
			}

			wList.addItemListener(this);
			wList.addActionListener(this);
			return (Component)wList;
		}
		else {
			Label label = new Label("No windows to select.");
			wList = null;
			vListMap = null;
			vwins = null;
			return (Component)label;
		}
	}

	/** Builds panel containing control buttons. */
	protected Panel buildControlPanel() {
		GridLayout layout = new GridLayout(4,2);
		layout.setVgap(2);
		layout.setHgap(2);
		Panel p = new Panel(layout);

		// Checkbox: synchronize cursor
		cCursor = new Checkbox("Sync cursor", true);
		p.add(cCursor);

		// Checkbox: propagate slice
		cSlice = new Checkbox("Sync z-slices",true);
		p.add(cSlice);

//		TODO: Give functionality to Synchronize Channels and Synchronize t-Frames checkboxes.
		
		// Checkbox: synchronize channels (for hyperstacks)
		cChannel = new Checkbox("Sync channels", true);
		p.add(cChannel);
		
		// Checkbox: synchronize time-frames (for hyperstacks)
		cFrame = new Checkbox("Sync t-frames", true);
		p.add(cFrame);
		
		// Checkbox: image coordinates
		cCoords = new Checkbox("Image coordinates", true);
		cCoords.addItemListener(this);
		p.add(cCoords);
 
		// Checkbox: image scaling (take pixel scale and offset into account)
		cScaling = new Checkbox("Image scaling", false);
		cScaling.addItemListener(this);
		p.add(cScaling);
		
		

		// Synchronize all windows.
		bSyncAll = new Button("Synchronize All");
		bSyncAll.addActionListener(this);
		p.add(bSyncAll);

		// Unsynchronize all windows.
		bUnsyncAll = new Button("Unsynchronize All");
		bUnsyncAll.addActionListener(this);
		p.add(bUnsyncAll);

		return p;
	}

	// --------------------------------------------------
	/** Compute bounding rectangle given current and old cursor
	locations. This is used to determine what part of image to
	redraw. */
	protected Rectangle boundingRect(int x, int y,
		int oldX, int oldY) {
		int dx = Math.abs(oldX - x)/2;
		int dy = Math.abs(oldY - y)/2;

		int xOffset = dx + SCALE * SZ;
		int yOffset = dy + SCALE * SZ;

		int xCenter = (x + oldX)/2;
		int yCenter = (y + oldY)/2;

		int xOrg = Math.max(xCenter - xOffset,0);
		int yOrg = Math.max(yCenter - yOffset,0);

		int w = 2 * xOffset;
		int h = 2 * yOffset;

		return new Rectangle(xOrg, yOrg, w, h);
	}

	/* Update the List of Windows in the GUI. Used by the "Update" button. */
	protected void updateWindowList() {	  
		// Don't build a new window list, while the old one is removed.
		// When an StackWindow is replaced by an OpenStackWindow, updateWindowList
		// is called again and the other components in the panel are removed, also.
		Component newWindowList = buildWindowList();
		panel.remove(0);
		panel.add(newWindowList,BorderLayout.NORTH,0);
		pack();
	}
	

	// --------------------------------------------------
	private void addSelections() {
		if(wList == null) return; // nothing to select

		int[] listIndexes = wList.getSelectedIndexes();
		Integer I;

		Vector v = new Vector();
		for(int n=0; n<listIndexes.length;++n) {
			I = (Integer)vListMap.elementAt(listIndexes[n]);
			v.addElement(I);
		}

		addWindows(v);
	}

	// --------------------------------------------------
	/** Adds "this" object as mouse listener and mouse motion listener
	to each of the windows in input array.	*/
	private void addWindows(Vector v) {
		Integer I;
		ImagePlus imp;
		ImageWindow iw;

		//	Handle initial case of no windows.
		if(vwins == null && v.size() > 0)
			vwins = new Vector();

		// Add all windows in vector to synchronized window list.
		for(int n=0; n<v.size();++n) {
			I = (Integer)v.elementAt(n);

			// Make sure input window is not already on list.
			if(!vwins.contains(I)) {
				imp = WindowManager.getImage(I.intValue());
				if (imp != null) {
					iw = imp.getWindow();
					iw.getCanvas().addMouseMotionListener(this);
					iw.getCanvas().addMouseListener(this);
					vwins.addElement(I);
				}
			}
		}
	}


	// --------------------------------------------------
	private void removeAllWindows() {
		if(vwins != null) {
			Integer I;
			for(int n = 0; n<vwins.size();++n) {
				I = (Integer)vwins.elementAt(n);
				removeWindow(I);
			}
			// Remove all windows from window list.
			vwins.removeAllElements();
		}

		// Deselect all elements on list (if present).
		if (wList == null) return;
		for(int n=0;n<wList.getItemCount();++n)
			wList.deselect(n);
	}


	// --------------------------------------------------
	/** Remove "this" object as mouse listener and mouse motion
	*	listener from the window with ID I.
	*/
	private void removeWindow(Integer I) {
		ImagePlus imp;
		ImageWindow iw;
		ImageCanvas ic;

		imp = WindowManager.getImage(I.intValue());
		if (imp != null) {
			iw = imp.getWindow();
			if (iw != null) {	
				ic = iw.getCanvas();
				if (ic != null) {
						ic.removeMouseListener(this);
						ic.removeMouseMotionListener(this);
						// Repaint to get rid of sync indicator.
						ic.paint(ic.getGraphics()); 
				}		
			}
		}
	}

	/** Draw cursor that indicates windows are synchronized. */
	private void drawSyncCursor(ImagePlus imp, int x, int y) {
		ImageCanvas ic = imp.getCanvas();
		if (ic==null) return;
		double xpSZ = ic.offScreenXD(x+SZ);
		double xmSZ = ic.offScreenXD(x-SZ);
		double ypSZ = ic.offScreenYD(y+SZ);
		double ymSZ = ic.offScreenYD(y-SZ);
		double xp2 = ic.offScreenXD(x+2);
		double xm2 = ic.offScreenXD(x-2);
		double yp2 = ic.offScreenYD(y+2);
		double ym2 = ic.offScreenYD(y-2);
		GeneralPath path = new GeneralPath();
		path.moveTo(xmSZ, ymSZ); path.lineTo(xm2, ym2);
		path.moveTo(xpSZ, ypSZ); path.lineTo(xp2, yp2);
		path.moveTo(xpSZ, ymSZ); path.lineTo(xp2, ym2);
		path.moveTo(xmSZ, ypSZ); path.lineTo(xm2, yp2);
		setCursor(imp, new ShapeRoi(path));
	}

	public synchronized void setCursor(ImagePlus imp, Roi cursor) {
		Overlay overlay2 = imp.getOverlay();
		if (overlay2!=null) {
			for (int i = overlay2.size()-1; i>=0; i--) {
				Roi roi2 = overlay2.get(i);
				if (roi2.isCursor()) 
					overlay2.remove(i);
			}
			if (cursor==null) {
				imp.setOverlay(overlay2);
				return;
			}
		} else
			overlay2 = new Overlay();
		if (cursor!=null) {
			overlay2.add(cursor);
			cursor.setStrokeColor(Color.red);
			cursor.setStrokeWidth(2);
			cursor.setNonScalable(true);
			cursor.setIsCursor(true);
			imp.setOverlay(overlay2);
		}
	}

	/** Store srcRect and Magnification of the currently active ImageCanvas ic */
	private void storeCanvasState(ImageCanvas ic) {
		currentMag = ic.getMagnification();
		currentSrcRect = new Rectangle(ic.getSrcRect());
	}
	
	// --------------------------------------------------
	/** Get ImagePlus from Windows-Vector vwins. */
	public ImagePlus getImageFromVector(int n) {
		if (vwins == null || n<0 || vwins.size() < n+1) return null;

		ImagePlus imp;
		imp = WindowManager.getImage(((Integer)vwins.elementAt(n)).intValue());
		return imp;
	}	 
	
	/** Get the title of image n from Windows-Vector vwins. If the image ends with
	 *	.tif, the extension is removed. */
	public String getImageTitleFromVector(int n) {
		if (vwins == null || n<0 || vwins.size() < n+1) return "";

		ImagePlus imp;
		imp = WindowManager.getImage(((Integer)vwins.elementAt(n)).intValue());
		String title = imp.getTitle();
		if (title.length()>=4 && (title.substring(title.length()-4)).equalsIgnoreCase(".tif")) {
			title = title.substring(0, title.length()-4);
		} else if (title.length()>=5 && (title.substring(title.length()-5)).equalsIgnoreCase(".tiff")) {
			title = title.substring(0, title.length()-5);
		}		 
		return title;
	}

	/** Get index of "image" in vector of synchronized windows, if image is in vector.
	 * Else return -1. 
	*/	   
	public int getIndexOfImage(ImagePlus image) {
		int index = -1;
		ImagePlus imp;
		if (vwins == null || vwins.size() == 0) 
			return index;
			
		for (int n=0; n<vwins.size(); n++){
			imp = WindowManager.getImage(((Integer)vwins.elementAt(n)).intValue());
			if (imp == image) {
				index = n;
				break;
			}
		}
		return index;
	}

	// --------------------------------------------------
	/** Get Screen Coordinates for ImageCanvas ic matching
	 *	the OffScreen Coordinates of the current ImageCanvas.
	 *	(srcRect and magnification stored after each received event.)
	 *	Input: The target ImageCanvas, the current ImageCanvas, 
	 *	x-ScreenCoordinate for current Canvas, y-ScreenCoordinate for current Canvas
	 *	If the "ImageScaling" checkbox is selected, Scaling and Offset 
	 *	of the images are taken into account. */
	protected Point getMatchingCoords(ImageCanvas ic, ImageCanvas icc, int x, int y) {

		double xOffScreen = currentSrcRect.x + (x/currentMag);
		double yOffScreen = currentSrcRect.y + (y/currentMag);

		if (cScaling.getState()) {
			Calibration cal = ((ImageWindow)ic.getParent()).getImagePlus().getCalibration();
			Calibration curCal = ((ImageWindow)icc.getParent()).getImagePlus().getCalibration();

			xOffScreen = ((xOffScreen-curCal.xOrigin)*curCal.pixelWidth)/cal.pixelWidth+cal.xOrigin;
			yOffScreen = ((yOffScreen-curCal.yOrigin)*curCal.pixelHeight)/cal.pixelHeight+cal.yOrigin;
		}			 

		int xnew = ic.screenXD(xOffScreen);
		int ynew = ic.screenYD(yOffScreen);

		return new Point(xnew, ynew);
	}

	// --------------------------------------------------
	/** Makes a new mouse event from MouseEvent e with the Canvas c
	 *	as source and the coordinates of Point p as X and Y.*/
	private MouseEvent adaptEvent(MouseEvent e, Component c, Point p) {
		return new MouseEvent(c, e.getID(), e.getWhen(), e.getModifiers(),
		   p.x, p.y, e.getClickCount(), e.isPopupTrigger());

	}
	    
	public Insets getInsets() {
		Insets i = super.getInsets();
		return new Insets(i.top+10, i.left+10, i.bottom+10, i.right+10);
	}

	public void close() {
		super.close();
		instance = null;
		location = getLocation();
	}
	
	public static SyncWindows getInstance() {
		return instance;
	}

	public String commandExecuting(String command) {
		if (vwins!=null && cScaling!=null && cScaling.getState() && ("In [+]".equals(command) || "Out [-]".equals(command))) {
			ImagePlus imp = WindowManager.getCurrentImage();
			ImageCanvas cic = imp!=null?imp.getCanvas():null;
			if (cic==null)
				return command;
			Point loc = cic.getCursorLoc();
			if (!cic.cursorOverImage()) {
				Rectangle srcRect = cic.getSrcRect();
				loc.x = srcRect.x + srcRect.width/2;
				loc.y = srcRect.y + srcRect.height/2;
			}
			int sx = cic.screenX(loc.x);
			int sy = cic.screenY(loc.y);
			for (int i=0; i<vwins.size(); i++) {
				imp = getImageFromVector(i);
				if (imp!=null) {
					ImageCanvas ic = imp.getCanvas();
					if (ic!=cic) {
						if ("In [+]".equals(command))
							ic.zoomIn(sx, sy);
						else
							ic.zoomOut(sx, sy);
						if (ic.getMagnification()<=1.0)
							imp.repaintWindow();
					}
				}
			}

		}
		return command;
	}

}	// SyncWindows_

/** The Listener interface for receiving DisplayChange events.
 *	The listener can be registered to an Object issuing DisplayChange events
 *	by its addDisplayChangeListener method.
 *	So far only OpenStackWindow used by SyncWindows is such an Object.
 *	*/
interface DisplayChangeListener extends java.util.EventListener {
	public void displayChanged(DisplayChangeEvent e);
}


/* -------------------------------------------------------------------------
/*
/* CLASS DisplayChangeEvent
/*
/* ------------------------------------------------------------------------- */

/** To be raised when a property of the image display has been changed */
class DisplayChangeEvent extends EventObject {

/** Type of change in display:
 *	Coordinate X, Y, Z, the Zoom, time, color channel.
 *	So far there is no need for properties other than Z.
 */
	public static final int X = 1;
	public static final int Y = 2;
	public static final int Z = 3;
	public static final int ZOOM = 4;
	public static final int T = 5;
	public static final int CHANNEL = 6;

	private int type;
	private int value;

	public DisplayChangeEvent(Object source, int type, int value) {
		super(source);
		this.type = type;
		this.value = value;
	}

	public int getType() {
		return type;
	}

	public void setType(int type) {
		this.type = type;
	}

	public int getValue() {
		return value;
	}

	public void setValue(int value) {
		this.value = value;
	}

}


/* -------------------------------------------------------------------------
/*
/* CLASS IJEventMulticaster
/*
/* ------------------------------------------------------------------------- */

/**
 * Multicaster for events special to ImageJ
 * <p>
 * Example how to implement an object, which fires DisplayChangeEvents using the
 * IJEventMulticaster:
 *
 * <pre><code>
 * public mySpecialWindow extends StackWindow {
 *
 *		DisplayChangeListener dclistener = null;
 *
 *		public synchronized void addDisplayChangeListener(DisplayChangeListener l) {
 *			dclistener = IJEventMulticaster.add(dclistener, l);
 *		}
 *
 *		public synchronized void removeDisplayChangeListener(DisplayChangeListener l) {
 *			dclistener = IJEventMulticaster.remove(dclistener, l);
 *		}
 *
 *		public void myEventFiringMethod(arguments) {
 *			... code ...
 *			if (dclistener != null) {
 *				DisplayChangeEvent dcEvent = new DisplayChangeEvent(this, DisplayChangeEvent.Z, zSlice);
 *				dclistener.displayChanged(dcEvent);
 *			}
 *			... code ...
 *		}
 *
 *		... other methods ...
 * }
 * </code></pre>
 *
 * To put in a new event-listener (by changing this class or extending it):
 * <p>
 * - Add the listener to the "implements" list.
 * <p>
 * - Add the methods of this listener to pass on the events (like displayChanged).
 * <p>
 * - Add the methods "add" and "remove" with the corresponding listener type.
 * <p>
 *
 * @author code taken from Sun's AWTEventMulticaster by J. Walter 2002-03-07
 */

class IJEventMulticaster extends AWTEventMulticaster implements DisplayChangeListener {

	IJEventMulticaster(EventListener a, EventListener b) {
		super(a,b);
	}

	/**
	 * Handles the DisplayChange event by invoking the
	 * displayChanged methods on listener-a and listener-b.
	 * @param e the DisplayChange event
	 */
	public void displayChanged(DisplayChangeEvent e) {
		((DisplayChangeListener)a).displayChanged(e);
		((DisplayChangeListener)b).displayChanged(e);
	}
	
	/**
	 * Adds DisplayChange-listener-a with DisplayChange-listener-b and
	 * returns the resulting multicast listener.
	 * @param a DisplayChange-listener-a
	 * @param b DisplayChange-listener-b
	 */
	public static DisplayChangeListener add(DisplayChangeListener a, DisplayChangeListener b) {
		return (DisplayChangeListener)addInternal(a, b);
	}
	
	/**
	 * Removes the old DisplayChange-listener from DisplayChange-listener-l and
	 * returns the resulting multicast listener.
	 * @param l DisplayChange-listener-l
	 * @param oldl the DisplayChange-listener being removed
	 */
	public static DisplayChangeListener remove(DisplayChangeListener l, DisplayChangeListener oldl) {
		return (DisplayChangeListener)removeInternal(l, oldl);
	}
	
}