File: mango_internal.sql.in

package info (click to toggle)
indigo 1.4.3-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 48,936 kB
  • sloc: ansic: 332,816; cpp: 169,470; python: 20,033; java: 13,701; cs: 9,979; asm: 8,475; sql: 6,743; xml: 6,354; javascript: 1,245; sh: 555; php: 506; makefile: 54
file content (230 lines) | stat: -rw-r--r-- 5,398 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
CREATE OR REPLACE FUNCTION getWeight(text, text)
RETURNS double precision
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION getWeight(bytea, text)
RETURNS double precision
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION getMass(text)
RETURNS double precision
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION getMass(bytea)
RETURNS double precision
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION smiles(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION smiles(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION cansmiles(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION cansmiles(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION molfile(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION molfile(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION cml(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION cml(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION checkMolecule(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION checkMolecule(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION gross(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION gross(bytea)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION fingerprint(text, text)
RETURNS bytea
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION fingerprint(bytea, text)
RETURNS bytea
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION compactmolecule(text, boolean)
RETURNS bytea
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION compactmolecule(bytea, boolean)
RETURNS bytea
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION inchi(text, text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION inchi(bytea, text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION inchikey(text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _sub_internal(text, text, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _sub_internal(text, bytea, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _smarts_internal(text, text, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _smarts_internal(text, bytea, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _exact_internal(text, text, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _exact_internal(text, bytea, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _gross_internal(text, text, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _gross_internal(text, text, bytea)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

--******************* MASS *******************

CREATE TYPE mass;

CREATE OR REPLACE FUNCTION _mass_in(cstring)
    RETURNS mass
    AS 'BINGO_PATHNAME'
    LANGUAGE C IMMUTABLE STRICT;

CREATE OR REPLACE FUNCTION _mass_out(mass)
    RETURNS cstring
    AS 'BINGO_PATHNAME'
    LANGUAGE C IMMUTABLE STRICT;

CREATE TYPE mass (
   internallength = variable, 
   input = _mass_in,
   output = _mass_out
);

CREATE OR REPLACE FUNCTION _match_mass_great(text, mass)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _match_mass_great(bytea, mass)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _match_mass_less(text, mass)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _match_mass_less(bytea, mass)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

--******************* SIMILARITY *******************

CREATE OR REPLACE FUNCTION getSimilarity(text, text, text)
RETURNS real
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION getSimilarity(bytea, text, text)
RETURNS real
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE TYPE sim AS (min_bound real, max_bound real, query_mol text, query_options text);

CREATE OR REPLACE FUNCTION _sim_internal(real, real, text, text, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION _sim_internal(real, real, text, bytea, text)
RETURNS boolean
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

--******************* STANDARDIZE *******************

CREATE OR REPLACE FUNCTION standardize(text, text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;

CREATE OR REPLACE FUNCTION standardize(bytea, text)
RETURNS text
AS 'BINGO_PATHNAME'
LANGUAGE C STRICT IMMUTABLE;