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Brief installation instructions
Infernal 1.1.1; July 2014
-------------------------------------------------------------
These are quick installation instructions. For complete documentation,
including customization and troubleshooting, please see the
Installation chapter in the Infernal User's Guide (Userguide.pdf).
Starting from a source distribution, infernal-1.1.1.tar.gz:
uncompress: uncompress infernal-1.1.1.tar.gz
unpack: tar xf infernal-1.1.1.tar
move into new directory: cd infernal-1.1.1
configure: ./configure
build: make
automated tests: make check
automated install: make install
Infernal is designed to run on POSIX-compatible platforms, including
UNIX, Linux and MacOS/X. The POSIX standard essentially includes all
operating systems except Microsoft Windows. We have tested most
extensively on Linux and on MacOS/X, because these are the machines we
develop on.
Infernal depends on vector parallelization methods that are supported
on most modern processors. Infernal requires either an x86-compatible
(IA32, IA64, or Intel64) processor that supports the SSE2 vector
instruction set, or a PowerPC processor that supports the Altivec/VMX
instruction set. If your platform does not support one of these vector
instruction sets, you won’t be able to install and run Infernal 1.1 on
it.
-------------------------------------------------------------
Starting from a Subversion (SVN) working copy:
If you have checked Infernal out from its Subversion repository, there's
some additional stuff you need to do one-time-only in your new working
directory:
ln -s easel/aclocal.m4 aclocal.m4
ln -s easel/aclocal.m4 hmmer/aclocal.m4
autoconf
(cd easel; autoconf; cd ../hmmer; autoconf;)
-------------------------------------------------------------
The Infernal development team
HHMI Janelia Farm Research Campus
http://infernal.janelia.org/
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