File: RIBOSUM80.mat

package info (click to toggle)
infernal 1.1.5-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 74,208 kB
  • sloc: ansic: 230,749; perl: 14,433; sh: 6,147; makefile: 3,071; python: 1,247
file content (33 lines) | stat: -rw-r--r-- 2,264 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
RIBOSUM80

    A           C           G           U           
    0.267892    0.213117    0.288337    0.230654    

    A           C           G           U           
A   1.745558    
C   -1.051807   0.906277    
G   -0.721380   -1.514579   0.787328    
U   -0.688359   -0.468115   -0.913018   1.180087    
H: 0.4112
E: -0.0404

    AA          AC          AG          AU          CA          CC          CG          CU          GA          GC          GG          GU          UA          UC          UG          UU          
AA  -3.609768   
AC  -6.506127   -1.768280   
AG  -9.407411   -9.668582   -1.926008   
AU  -4.455520   -1.650819   -4.949787   3.948389    
CA  -10.196147  -9.706311   -10.336261  -4.961209   -5.744272   
CC  -12.957845  -7.719248   -13.618086  -2.726618   -9.757999   -3.979454   
CG  -3.612297   -4.800440   -2.219731   2.276094    -2.599841   -4.065226   5.202425    
CU  -12.299993  -9.714018   -10.830670  -3.575351   -8.336976   -5.568591   -4.322772   -3.347842   
GA  -7.538750   -7.033054   -8.183130   -3.725285   -6.881686   -10.365318  -4.520574   -8.136176   -1.955531   
GC  -5.259791   -2.895015   -4.985800   3.111346    -4.397932   -2.839723   3.030680    -2.436134   -2.430183   5.519470    
GG  -8.518239   -9.841058   -4.452393   -4.525800   -10.397496  -10.780039  -4.308384   -8.333549   -8.340807   -3.752757   -2.240185   
GU  -5.719622   -4.010698   -6.631694   0.871140    -5.487174   -5.869794   0.463874    -4.232396   -5.355824   1.682482    -5.172784   3.108453    
UA  -3.004502   -3.973166   -2.696820   2.006311    -2.848100   -4.796035   3.149964    -3.972411   -4.109708   2.325969    -5.306015   0.216794    4.424326    
UC  -12.472854  -8.558313   -9.189024   -3.870156   -7.558257   -7.274689   -4.279786   -4.987949   -7.577348   -3.737940   -10.301192  -4.728122   -3.416278   -4.716650   
UG  -3.871419   -6.210116   -5.644825   -0.129079   -5.770111   -6.604395   1.466066    -5.681180   -6.921068   0.630552    -4.364913   -1.199210   1.202781    -3.949829   2.974949    
UU  -8.876289   -8.183077   -8.588759   -2.478560   -9.039040   -5.308607   -2.661019   -5.900980   -9.438206   -2.482264   -5.963380   -3.033035   -1.728493   -6.959713   -3.158729   -1.300781   
H: 3.3108
E: -2.4265