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Test cases for INFERNAL search sensitivity
SRE, Fri May 17 12:00:03 2002
trna1415G.sto - tRNA alignment. 1415 sequences.
mito-celegans.gb - C. elegans mito genome. 13794 bp. [Genbank]
mito-celegans-trna.gb - Locations of 22 mitochondrial tRNAs [GDF]
mito-celegans-trna.fa - Sequences of 22 mitochondrial tRNAs. [FASTA]
srp-euk.sto - SRP RNA alignment. 37 sequences.
ffs-frag.fa - 20kb fragment of E. coli m54, GB:U00096. [FASTA]
ffs is annotated at 15648..15785;
is really at 15672..15784 by BLASTN to [Larsen93] seq
ffs-ecoli.fa - 113 nt 4.5S ffs RNA from E. coli [Larsen93]
rnaseP-eubact.sto - Jim Brown's a_bacterial_rnas.gb. xref ~/db/RNaseP.
340 sequences.
rnaseP-frag.fa - 20 kb fragment of B. subtilis, GB:AL009126 [FASTA]
frag is from 2320001..2340000
in this frag, RNaseP is 10962..10562 (rev strand)
rnaseP-bsu.fa - 401 nt P RNA from B. subtilis [JW Brown's db]
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