File: DicomSliceRead.py

package info (click to toggle)
insighttoolkit 3.20.1%2Bgit20120521-3
  • links: PTS, VCS
  • area: main
  • in suites: wheezy
  • size: 80,652 kB
  • sloc: cpp: 458,133; ansic: 196,223; fortran: 28,000; python: 3,839; tcl: 1,811; sh: 1,184; java: 583; makefile: 430; csh: 220; perl: 193; xml: 20
file content (34 lines) | stat: -rw-r--r-- 689 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
#
#  Example on the use of DicomImageIO for reading a single DICOM slice, rescale
#  the intensities and save it in a different file format.
#

from InsightToolkit import *

from sys import argv

#
# Reads an image in  16bits/pixel 
# and save it as      8bits/pixel
#
reader = itkImageFileReaderUS2_New()
writer = itkImageFileWriterUC2_New()

dicomIO = itkDicomImageIO_New()

reader.SetImageIO( dicomIO.GetPointer() )

filter  = itkRescaleIntensityImageFilterUS2UC2_New()

filter.SetOutputMinimum( 0 )
filter.SetOutputMaximum(255)

filter.SetInput( reader.GetOutput() )
writer.SetInput( filter.GetOutput() )

reader.SetFileName( argv[1] )
writer.SetFileName( argv[2] )

writer.Update()