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/*=========================================================================
Program: Insight Segmentation & Registration Toolkit
Module: ExpectationMaximizationBrainWebValidationApp.cxx
Language: C++
Date: $Date$
Version: $Revision$
Copyright (c) Insight Software Consortium. All rights reserved.
See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#include "itkWin32Header.h"
#include "OptionList.h"
#include "ValidationSampleGenerator.h"
#include "ParameterTable.h"
#include "ExpectationMaximizationValidationApp.h"
void print_usage()
{
std::cout << "kmeans clustering 1.0 (17. Dec. 2001)" << std::endl ;
std::cout << "usage: ExpectationMaximizationBrainWebValidationApp --images file..." << std::endl ;
std::cout << " --mask file --iteration int" << std::endl ;
std::cout << " --parameters file " << std::endl ;
std::cout << " --result file " << std::endl ;
std::cout << "" << std::endl ;
std::cout << "--images file..." << std::endl ;
std::cout << " image file name with intesnity values [meta image format]"
<< std::endl ;
std::cout << "--mask file" << std::endl ;
std::cout << " class label image file name that will have the class labels for pixels"
<< std::endl ;
std::cout << " in the target image file [meta image format]" << std::endl ;
std::cout << "--iteration int" << std::endl ;
std::cout << "--parameters file" << std::endl ;
std::cout << " data file has initial parameters for each class" << std::endl ;
std::cout << "" << std::endl ;
std::cout << "example: ExpectationMaximizationValidationApp --images brainweb.T1.1mm.0.0.mhd "
<< std::endl ;
std::cout << " brainweb.PD.1mm.0.0.mhd" << std::endl ;
std::cout << " --mask Inputs/20Normals_T1_seg/110_3.mhd" << std::endl ;
std::cout << " --bucket-size 10 --iteration 200" << std::endl ;
}
int main(int argc, char* argv[])
{
namespace stat = itk::Statistics ;
if (argc <= 1)
{
print_usage() ;
exit(0) ;
}
ExpectationMaximizationValidationApp< unsigned char, 2 > app ;
app.SetCommandLineOptions(argc, argv) ;
std::vector< unsigned int > selectedClasses ;
selectedClasses.push_back(1) ;
selectedClasses.push_back(2) ;
selectedClasses.push_back(3) ;
app.SetSelectedClasses(selectedClasses) ;
app.Run() ;
return 0 ;
}
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