1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
|
#-----------------------------------------------------------------------------
# Include directories for other projects installed on the system.
SET(ITK_INCLUDE_DIRS_SYSTEM "")
IF(ITK_USE_SYSTEM_VXL)
# System VXL include directories.
SET(ITK_INCLUDE_DIRS_SYSTEM ${ITK_INCLUDE_DIRS_SYSTEM}
${VXL_VCL_INCLUDE_DIR} ${VXL_CORE_INCLUDE_DIR}
)
ENDIF(ITK_USE_SYSTEM_VXL)
IF(ITK_USE_SYSTEM_GDCM)
SET(ITK_INCLUDE_DIRS_SYSTEM ${GDCM_DIR})
ENDIF(ITK_USE_SYSTEM_GDCM)
#-----------------------------------------------------------------------------
# Include directories from the build tree.
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_BINARY_DIR})
# These directories are always needed.
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Code/Algorithms
${ITK_SOURCE_DIR}/Code/BasicFilters
${ITK_SOURCE_DIR}/Code/Common
${ITK_SOURCE_DIR}/Code/Numerics
${ITK_SOURCE_DIR}/Code/IO
${ITK_SOURCE_DIR}/Code/Numerics/FEM
${ITK_SOURCE_DIR}/Code/Numerics/NeuralNetworks
${ITK_SOURCE_DIR}/Code/SpatialObject
${ITK_SOURCE_DIR}/Utilities/MetaIO
${ITK_SOURCE_DIR}/Utilities/NrrdIO
${ITK_BINARY_DIR}/Utilities/NrrdIO
${ITK_SOURCE_DIR}/Utilities/DICOMParser
${ITK_BINARY_DIR}/Utilities/DICOMParser
${ITK_BINARY_DIR}/Utilities/expat
${ITK_SOURCE_DIR}/Utilities/expat
${ITK_SOURCE_DIR}/Utilities/nifti/niftilib
${ITK_SOURCE_DIR}/Utilities/nifti/znzlib
${ITK_SOURCE_DIR}/Utilities/itkExtHdrs
${ITK_BINARY_DIR}/Utilities
${ITK_SOURCE_DIR}/Utilities
)
IF( NOT ITK_USE_REVIEW_STATISTICS )
SET( ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Code/Numerics/Statistics )
ENDIF( NOT ITK_USE_REVIEW_STATISTICS )
# For explicit instantiation. Probably should make it ${ITK_BINARY_DIR}/Code/Common
IF(ITK_EXPLICIT_INSTANTIATION)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_BINARY_DIR}/Code/Common
)
ENDIF(ITK_EXPLICIT_INSTANTIATION)
# Directories needed when using FFTW
IF(USE_FFTWF OR USE_FFTWD)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${FFTW_INCLUDE_PATH}
)
ENDIF(USE_FFTWF OR USE_FFTWD)
# VXL include directories.
IF(NOT ITK_USE_SYSTEM_VXL)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Utilities/vxl/v3p/netlib
${ITK_SOURCE_DIR}/Utilities/vxl/vcl
${ITK_SOURCE_DIR}/Utilities/vxl/core
${ITK_BINARY_DIR}/Utilities/vxl/v3p/netlib
${ITK_BINARY_DIR}/Utilities/vxl/vcl
${ITK_BINARY_DIR}/Utilities/vxl/core
)
ENDIF(NOT ITK_USE_SYSTEM_VXL)
# GDCM include directories.
IF(NOT ITK_USE_SYSTEM_GDCM)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_BINARY_DIR}/Utilities/gdcm
${ITK_SOURCE_DIR}/Utilities/gdcm/src
)
ENDIF(NOT ITK_USE_SYSTEM_GDCM)
# LIBXML2 include directories.
IF(ITK_USE_LIBXML2)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_BINARY_DIR}/Utilities/itklibxml2
)
ENDIF(ITK_USE_LIBXML2)
# Patended include directories added only if the user explicitly enabled the
# ITK_USE_PATENTED option. Users are responsible for getting a license from the
# patent holders in order to use any of those methods.
IF(ITK_USE_PATENTED)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Code/Patented
)
ENDIF(ITK_USE_PATENTED)
# Review include directories added only if the user explicitly enabled the
# ITK_USE_REVIEW option. Users are responsible for getting a license from the
# copyright holders in order to use any of those methods. The methods are not
# covered by the backward compatibility policy either.
IF(ITK_USE_REVIEW)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Code/Review
)
IF(ITK_USE_REVIEW_STATISTICS)
SET(ITK_INCLUDE_DIRS_BUILD_TREE ${ITK_INCLUDE_DIRS_BUILD_TREE}
${ITK_SOURCE_DIR}/Code/Review/Statistics )
ENDIF(ITK_USE_REVIEW_STATISTICS)
ENDIF(ITK_USE_REVIEW)
IF( NOT ITK_USE_REVIEW_STATISTICS )
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS} Numerics/Statistics)
ENDIF( NOT ITK_USE_REVIEW_STATISTICS )
#-----------------------------------------------------------------------------
# Include directories needed for .cxx files in ITK. These include
# directories will NOT be available to user projects.
SET(ITK_INCLUDE_DIRS_BUILD_TREE_CXX)
IF(ITK_USE_SYSTEM_VXL)
SET(ITK_INCLUDE_DIRS_BUILD_TREE_CXX ${ITK_INCLUDE_DIRS_BUILD_TREE_CXX}
${VXL_NETLIB_INCLUDE_DIR})
ELSE(ITK_USE_SYSTEM_VXL)
SET(ITK_INCLUDE_DIRS_BUILD_TREE_CXX ${ITK_INCLUDE_DIRS_BUILD_TREE_CXX}
${ITK_SOURCE_DIR}/Utilities/vxl/v3p/netlib)
ENDIF(ITK_USE_SYSTEM_VXL)
#-----------------------------------------------------------------------------
# Include directories from the install tree.
SET(ITK_INSTALL_INCLUDE_PATH "${CMAKE_INSTALL_PREFIX}${ITK_INSTALL_INCLUDE_DIR}")
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
Algorithms
BasicFilters
Common
Numerics
IO
Numerics/FEM
Numerics/NeuralNetworks
SpatialObject
Utilities/MetaIO
Utilities/NrrdIO
Utilities/DICOMParser
Utilities/expat
Utilities/nifti/niftilib
Utilities/nifti/znzlib
Utilities/itkExtHdrs
Utilities
)
IF(NOT ITK_USE_SYSTEM_VXL)
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
Utilities/vxl/v3p/netlib
Utilities/vxl/vcl
Utilities/vxl/core
)
ENDIF(NOT ITK_USE_SYSTEM_VXL)
IF(NOT ITK_USE_SYSTEM_GDCM)
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
gdcm
gdcm/src
)
ENDIF(NOT ITK_USE_SYSTEM_GDCM)
# Patended include directories added only if the user explicitly enabled the
# ITK_USE_PATENTED option. Users are responsible for getting a license from the
# patent holders in order to use any of those methods.
IF(ITK_USE_PATENTED)
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
Patented
)
ENDIF(ITK_USE_PATENTED)
# Review include directories added only if the user explicitly enabled the
# ITK_USE_REVIEW option. Users are responsible for getting a license from the
# copyright holders in order to use any of those methods. The methods are not
# covered by the backward compatibility policy either.
IF(ITK_USE_REVIEW)
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
Review
)
IF(ITK_USE_REVIEW_STATISTICS)
SET(ITK_INCLUDE_RELATIVE_DIRS ${ITK_INCLUDE_RELATIVE_DIRS}
Review/Statistics )
ENDIF(ITK_USE_REVIEW_STATISTICS)
ENDIF(ITK_USE_REVIEW)
#-----------------------------------------------------------------------------
# Include directories for 3rd-party utilities provided by ITK.
ITK_THIRD_PARTY_INCLUDE2(PNG)
ITK_THIRD_PARTY_INCLUDE2(TIFF)
ITK_THIRD_PARTY_INCLUDE2(ZLIB)
IF(ITK_USE_SYSTEM_LIBXML2 OR ITK_USE_LIBXML2)
ITK_THIRD_PARTY_INCLUDE(LIBXML2 libxml2)
ENDIF(ITK_USE_SYSTEM_LIBXML2 OR ITK_USE_LIBXML2)
|
