File: itkExtensionVelocitiesImageFilter.h

package info (click to toggle)
insighttoolkit 3.20.1%2Bgit20120521-5
  • links: PTS, VCS
  • area: main
  • in suites: jessie, jessie-kfreebsd
  • size: 80,672 kB
  • ctags: 85,253
  • sloc: cpp: 458,133; ansic: 196,222; fortran: 28,000; python: 3,839; tcl: 1,811; sh: 1,184; java: 583; makefile: 428; csh: 220; perl: 193; xml: 20
file content (146 lines) | stat: -rw-r--r-- 5,818 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    itkExtensionVelocitiesImageFilter.h
  Language:  C++
  Date:      $Date$
  Version:   $Revision$

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkExtensionVelocitiesImageFilter_h
#define __itkExtensionVelocitiesImageFilter_h

#include "itkLevelSetVelocityNeighborhoodExtractor.h"
#include "itkFastMarchingExtensionImageFilter.h"
#include "itkReinitializeLevelSetImageFilter.h"

namespace itk
{
/** \class ExtensionVelocitiesImageFilter
 *  \brief Extend velocities smoothly from a particular level set.
 *
 * ExtensionVelocitiesImageFilter extends velocities smoothly from a particular
 * level set.
 *
 * This class is templated over the image type which represents
 * the level set, the type of the velocity and the
 * number of velocities to be extended.
 *
 * This class supports narrowbanding. If the input narrowband is provided,
 * the algorithm will only locate the level set within the input narrowband.
 * For the output, the extended velocity is only valid for a distance
 * of OutputNarrowBandwidth / 2 of either side of the level set of interest.
 *
 * Implementation of this class is based on Chapter 11 of
 * "Level Set Methods and Fast Marching Methods", J.A. Sethian,
 * Cambridge Press, Second edition, 1999.
 *
 * \ingroup LevelSetSegmentation 
 */
template <
  class TLevelSet,
  class TAuxValue = float,
  unsigned int VAuxDimension = 1
  >
class ITK_EXPORT ExtensionVelocitiesImageFilter :
    public ReinitializeLevelSetImageFilter<TLevelSet>
{
public:

  /** Standard class typedefs. */
  typedef ExtensionVelocitiesImageFilter             Self;
  typedef ReinitializeLevelSetImageFilter<TLevelSet> Superclass;
  typedef SmartPointer<Self>                         Pointer;
  typedef SmartPointer<const Self>                   ConstPointer;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Run-time type information (and related methods). */
  itkTypeMacro(ExtensionVelocitiesImageFilter, ReinitializeLevelSetImageFilter);

  /** The type of level set and the pointer type. */
  typedef LevelSetTypeDefault<TLevelSet>               LevelSetType;
  typedef typename LevelSetType::LevelSetPointer       LevelSetPointer;
  typedef typename LevelSetType::LevelSetConstPointer  LevelSetConstPointer;
  typedef typename LevelSetType::PixelType             PixelType;
  typedef typename LevelSetType::NodeType              NodeType;
  typedef typename LevelSetType::NodeContainer         NodeContainer;
  typedef typename LevelSetType::NodeContainerPointer  NodeContainerPointer;

  /** The dimension of the level set. */
  itkStaticConstMacro(SetDimension, unsigned int,LevelSetType::SetDimension);

  /** AuxVarType typedef support. */
  typedef AuxVarTypeDefault<TAuxValue,VAuxDimension,
                            itkGetStaticConstMacro(SetDimension)>
                                                     AuxVarType;
  typedef typename AuxVarType::AuxValueType          AuxValueType;
  typedef typename AuxVarType::AuxValueVectorType    AuxValueVectorType;
  typedef typename AuxVarType::AuxValueContainer     AuxValueContainer;
  typedef typename AuxVarType::AuxImageType          AuxImageType;
  typedef typename AuxVarType::AuxImagePointer       AuxImagePointer;
  typedef typename AuxVarType::AuxImageConstPointer  AuxImageConstPointer;

  /** Number of velocity images to be extended. */
  itkStaticConstMacro(AuxDimension, unsigned int,VAuxDimension);

  /** Set/Get one of the input velocity images to be extended. */
  void SetInputVelocityImage(const AuxImageType * ptr, unsigned int idx = 0);
  const AuxImageType * GetInputVelocityImage(unsigned int idx = 0);

  /** Get one of the extended velocity images. */
  AuxImageType * GetOutputVelocityImage( unsigned int idx = 0 );

#ifdef ITK_USE_CONCEPT_CHECKING
  /** Begin concept checking */
  itkConceptMacro(AuxValueHasNumericTraitsCheck,
    (Concept::HasNumericTraits<TAuxValue>));
  itkConceptMacro(LevelSetOStreamWritableCheck,
    (Concept::OStreamWritable<PixelType>));
  /** End concept checking */
#endif

protected:
  ExtensionVelocitiesImageFilter();
  ~ExtensionVelocitiesImageFilter(){};

  virtual void GenerateDataFull();
  virtual void GenerateDataNarrowBand();
  virtual void AllocateOutput();

  virtual void EnlargeOutputRequestedRegion( DataObject * );

private:
  ExtensionVelocitiesImageFilter(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented

  /** Internal typedefs. SpeedImageType defined to work around the Borland
   * compiler's improper handling of default template parameters that use
   * dependent non-type templates. */
  typedef Image<float, itkGetStaticConstMacro(SetDimension) > SpeedImageType;
  
  typedef LevelSetVelocityNeighborhoodExtractor<TLevelSet,TAuxValue,VAuxDimension> 
                                                  LocatorType;
  typedef FastMarchingExtensionImageFilter<TLevelSet,TAuxValue,VAuxDimension,SpeedImageType> 
                                                  FastMarchingImageFilterType;

  typename LocatorType::Pointer                    m_Locator;
  typename FastMarchingImageFilterType::Pointer    m_Marcher;

};

} // namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkExtensionVelocitiesImageFilter.txx"
#endif

#endif