File: itkSmoothingRecursiveGaussianImageFilter.h

package info (click to toggle)
insighttoolkit 3.6.0-3
  • links: PTS
  • area: main
  • in suites: lenny
  • size: 94,956 kB
  • ctags: 74,981
  • sloc: cpp: 355,621; ansic: 195,070; fortran: 28,713; python: 3,802; tcl: 1,996; sh: 1,175; java: 583; makefile: 415; csh: 184; perl: 175
file content (171 lines) | stat: -rwxr-xr-x 5,935 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkSmoothingRecursiveGaussianImageFilter.h,v $
  Language:  C++
  Date:      $Date: 2007-09-26 15:54:25 $
  Version:   $Revision: 1.13 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkSmoothingRecursiveGaussianImageFilter_h
#define __itkSmoothingRecursiveGaussianImageFilter_h

#include "itkRecursiveGaussianImageFilter.h"
#include "itkCastImageFilter.h"
#include "itkImage.h"
#include "itkPixelTraits.h"
#include "itkCommand.h"


namespace itk
{

/** \class SmoothingRecursiveGaussianImageFilter
 * \brief Computes the smoothing of an image by convolution
 *        with the Gaussian kernels implemented as IIR filters.
 * 
 * This filter is implemented using the recursive gaussian
 * filters. For multi-component images, the filter works on each 
 * component independently.
 *
 * 
 * \ingroup IntensityImageFilters
 * \ingroup Singlethreaded
 */
template <typename TInputImage, 
          typename TOutputImage= TInputImage >
class ITK_EXPORT SmoothingRecursiveGaussianImageFilter:
    public ImageToImageFilter<TInputImage,TOutputImage>
{
public:
  /** Standard class typedefs. */
  typedef SmoothingRecursiveGaussianImageFilter  Self;
  typedef ImageToImageFilter<TInputImage,TOutputImage> Superclass;
  typedef SmartPointer<Self>                   Pointer;
  typedef SmartPointer<const Self>        ConstPointer;
  
  
  /** Pixel Type of the input image */
  typedef TInputImage                                    InputImageType;
  typedef TOutputImage                                   OutputImageType;
  typedef typename TInputImage::PixelType                PixelType;
  typedef typename NumericTraits<PixelType>::RealType    RealType;
  typedef typename NumericTraits<PixelType>::ScalarRealType ScalarRealType;


  /** Runtime information support. */
  itkTypeMacro(SmoothingRecursiveGaussianImageFilter, 
               ImageToImageFilter);

  /** Image dimension. */
  itkStaticConstMacro(ImageDimension, unsigned int,
                      TInputImage::ImageDimension);

  /** Define the image type for internal computations 
      RealType is usually 'double' in NumericTraits. 
      Here we prefer float in order to save memory.  */

  typedef typename NumericTraits< PixelType >::FloatType   InternalRealType;
  typedef Image<InternalRealType, 
                itkGetStaticConstMacro(ImageDimension) >   RealImageType;

  /**  The first in the pipeline  */
  typedef RecursiveGaussianImageFilter<
    InputImageType,
    RealImageType
    >    FirstGaussianFilterType;

  /**  Smoothing filter type */
  typedef RecursiveGaussianImageFilter<
    RealImageType,
    RealImageType
    >    InternalGaussianFilterType;

  /**  The last in the pipeline  */
  typedef CastImageFilter<
    RealImageType,
    OutputImageType
    >    CastingFilterType;


  /**  Pointer to a gaussian filter.  */
  typedef typename InternalGaussianFilterType::Pointer    InternalGaussianFilterPointer;

  /**  Pointer to the first gaussian filter.  */
  typedef typename FirstGaussianFilterType::Pointer       FirstGaussianFilterPointer;

  /**  Pointer to the last filter, casting  */
  typedef typename CastingFilterType::Pointer             CastingFilterPointer;

  /**  Pointer to the Output Image */
  typedef typename OutputImageType::Pointer                  OutputImagePointer;                                  

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Set Sigma value. Sigma is measured in the units of image spacing.  */
  void SetSigma( ScalarRealType sigma );
  itkGetMacro(Sigma, ScalarRealType);

  /** Define which normalization factor will be used for the Gaussian */
  void SetNormalizeAcrossScale( bool normalizeInScaleSpace );
  itkGetMacro( NormalizeAcrossScale, bool );

#ifdef ITK_USE_CONCEPT_CHECKING
  /** Begin concept checking */
  itkConceptMacro(InputHasNumericTraitsCheck,
                  (Concept::HasNumericTraits<PixelType>));
  /** End concept checking */
#endif

protected:
  SmoothingRecursiveGaussianImageFilter();
  virtual ~SmoothingRecursiveGaussianImageFilter() {};
  void PrintSelf(std::ostream& os, Indent indent) const;
  
  /** Generate Data */
  void GenerateData( void );

  /** SmoothingRecursiveGaussianImageFilter needs all of the input to produce an
   * output. Therefore, SmoothingRecursiveGaussianImageFilter needs to provide
   * an implementation for GenerateInputRequestedRegion in order to inform
   * the pipeline execution model.
   * \sa ImageToImageFilter::GenerateInputRequestedRegion() */
  virtual void GenerateInputRequestedRegion() throw(InvalidRequestedRegionError);

  // Override since the filter produces the entire dataset
  void EnlargeOutputRequestedRegion(DataObject *output);

private:
  SmoothingRecursiveGaussianImageFilter(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented
  
  InternalGaussianFilterPointer         m_SmoothingFilters[ImageDimension-1];
  FirstGaussianFilterPointer            m_FirstSmoothingFilter;
  CastingFilterPointer                  m_CastingFilter;

  /** Normalize the image across scale space */
  bool m_NormalizeAcrossScale; 

  /** Standard deviation of the gaussian used for smoothing */
  ScalarRealType                        m_Sigma;
};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkSmoothingRecursiveGaussianImageFilter.txx"
#endif

#endif