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/*=========================================================================
Program: Insight Segmentation & Registration Toolkit
Module: $RCSfile: itkVectorExpandImageFilter.txx,v $
Language: C++
Date: $Date: 2008-01-19 19:50:01 $
Version: $Revision: 1.20 $
Copyright (c) Insight Software Consortium. All rights reserved.
See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#ifndef _itkVectorExpandImageFilter_txx
#define _itkVectorExpandImageFilter_txx
#include "itkVectorExpandImageFilter.h"
#include "itkImageRegionIteratorWithIndex.h"
#include "itkExceptionObject.h"
#include "itkObjectFactory.h"
#include "itkNumericTraits.h"
#include "itkProgressReporter.h"
namespace itk
{
/**
* Default constructor
*/
template <class TInputImage, class TOutputImage>
VectorExpandImageFilter<TInputImage,TOutputImage>
::VectorExpandImageFilter()
{
// Set default factors to 1
for(unsigned int j = 0; j < ImageDimension; j++ )
{
m_ExpandFactors[j] = 1;
}
// Setup the default interpolator
typename DefaultInterpolatorType::Pointer interp =
DefaultInterpolatorType::New();
m_Interpolator =
static_cast<InterpolatorType*>( interp.GetPointer() );
// Set default padding value to zero
for( unsigned int k = 0; k < VectorDimension; k++ )
{
m_EdgePaddingValue[k] = NumericTraits<OutputValueType>::Zero;
}
}
/**
* Standard "PrintSelf" method
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::PrintSelf(std::ostream& os, Indent indent) const
{
Superclass::PrintSelf( os, indent );
unsigned int j;
os << indent << "ExpandFactors: [" ;
for( j = 0; j < ImageDimension - 1; j++ )
{
os << m_ExpandFactors[j] << ", ";
}
os << m_ExpandFactors[j] << "]" << std::endl;
os << indent << "Interpolator: ";
os << m_Interpolator.GetPointer() << std::endl;
os << indent << "EdgePaddingValue: "
<< static_cast<typename NumericTraits<OutputPixelType>::PrintType>(m_EdgePaddingValue)
<< std::endl;
}
/**
* Set expand factors from an array of unsigned int.
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::SetExpandFactors( const ExpandFactorsType factors[] )
{
unsigned int j;
for( j = 0; j < ImageDimension; j++ )
{
if( factors[j] != m_ExpandFactors[j] ) break;
}
if( j < ImageDimension )
{
this->Modified();
for( j = 0; j < ImageDimension; j++ )
{
m_ExpandFactors[j] = factors[j];
if( m_ExpandFactors[j] < 1 ) m_ExpandFactors[j] = 1;
}
}
}
/**
* Set expand factors from a single unsigned int
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::SetExpandFactors( const ExpandFactorsType factor )
{
unsigned int j;
for( j = 0; j < ImageDimension; j++ )
{
if( factor != m_ExpandFactors[j] ) break;
}
if( j < ImageDimension )
{
this->Modified();
for( j = 0; j < ImageDimension; j++ )
{
m_ExpandFactors[j] = factor;
if( m_ExpandFactors[j] < 1 ) m_ExpandFactors[j] = 1;
}
}
}
/**
* Set expand factors from an array of unsigned int.
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::SetExpandFactors( const unsigned int factors[] )
{
unsigned int j;
for( j = 0; j < ImageDimension; j++ )
{
if( factors[j] != m_ExpandFactors[j] ) break;
}
if( j < ImageDimension )
{
this->Modified();
for( j = 0; j < ImageDimension; j++ )
{
m_ExpandFactors[j] = (ExpandFactorsType) factors[j];
if( m_ExpandFactors[j] < 1 ) m_ExpandFactors[j] = 1;
}
}
}
/**
* Set the edge padding value
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::SetEdgePaddingValue( const OutputPixelType& value )
{
unsigned int i;
for( i = 0; i < OutputPixelType::Dimension; i++ )
{
if( value[i] != m_EdgePaddingValue[i] )
{
break;
}
}
if( i < OutputPixelType::Dimension )
{
this->Modified();
m_EdgePaddingValue = value;
}
}
/**
* BeforeThreadedGenerateData
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::BeforeThreadedGenerateData()
{
if( !m_Interpolator || !this->GetInput() )
{
itkExceptionMacro(<< "Interpolator and/or Input not set");
}
// Connect input image to interpolator
m_Interpolator->SetInputImage( this->GetInput() );
}
/**
* ThreadedGenerateData
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::ThreadedGenerateData(const OutputImageRegionType& outputRegionForThread,
int threadId)
{
// Get the input and output pointers
OutputImagePointer outputPtr = this->GetOutput();
// Iterator for walking the output
typedef
ImageRegionIteratorWithIndex<TOutputImage> OutputIterator;
OutputIterator outIt( outputPtr, outputRegionForThread );
// Define a few indices that will be used to translate from an input
// pixel to and output pixel
typename TOutputImage::IndexType outputIndex;
typename InterpolatorType::ContinuousIndexType inputIndex;
typedef typename InterpolatorType::OutputType InterpolatedType;
OutputPixelType outputValue;
InterpolatedType interpolatedValue;
// Support progress methods/callbacks
ProgressReporter progress(this, threadId, outputRegionForThread.GetNumberOfPixels());
// Walk the output region, and interpolate the input image
while( !outIt.IsAtEnd())
{
// Determine the index of the output pixel
outputIndex = outIt.GetIndex();
// Determine the input pixel location associated with this output pixel.
// Don't need to check for division by zero because the factors are
// clamped to be minimum for 1.
for(unsigned int j = 0; j < ImageDimension; j++ )
{
inputIndex[j] = (double) outputIndex[j] /
(double) m_ExpandFactors[j];
}
// interpolate value and write to output
if( m_Interpolator->IsInsideBuffer( inputIndex ) )
{
interpolatedValue =
m_Interpolator->EvaluateAtContinuousIndex( inputIndex );
for( unsigned int k = 0; k < VectorDimension; k++ )
{
outputValue[k] = static_cast<OutputValueType>(
interpolatedValue[k] );
}
outIt.Set( outputValue );
}
else
{
outIt.Set( m_EdgePaddingValue );
}
++outIt;
progress.CompletedPixel();
}
}
/**
* GenerateInputRequesteRegion
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::GenerateInputRequestedRegion()
{
// Call the superclass' implementation of this method
Superclass::GenerateInputRequestedRegion();
// Get pointers to the input and output
InputImagePointer inputPtr =
const_cast< TInputImage * >( this->GetInput() );
OutputImagePointer outputPtr = this->GetOutput();
if ( !inputPtr || !outputPtr )
{
return;
}
// We need to compute the input requested region (size and start index)
unsigned int i;
const typename TOutputImage::SizeType& outputRequestedRegionSize
= outputPtr->GetRequestedRegion().GetSize();
const typename TOutputImage::IndexType& outputRequestedRegionStartIndex
= outputPtr->GetRequestedRegion().GetIndex();
typename TInputImage::SizeType inputRequestedRegionSize;
typename TInputImage::IndexType inputRequestedRegionStartIndex;
/**
* inputRequestedSize = (outputRequestedSize / ExpandFactor) + 1)
* The extra 1 above is to take care of edge effects when streaming.
*/
for (i = 0; i < TInputImage::ImageDimension; i++)
{
inputRequestedRegionSize[i]
= (long) vcl_ceil((double)outputRequestedRegionSize[i] /
(double) m_ExpandFactors[i] ) + 1;
inputRequestedRegionStartIndex[i]
= (long) vcl_floor((double)outputRequestedRegionStartIndex[i] /
(double)m_ExpandFactors[i] );
}
typename TInputImage::RegionType inputRequestedRegion;
inputRequestedRegion.SetSize( inputRequestedRegionSize );
inputRequestedRegion.SetIndex( inputRequestedRegionStartIndex );
// crop the input requested region at the input's largest possible region
if ( inputRequestedRegion.Crop(inputPtr->GetLargestPossibleRegion()) )
{
inputPtr->SetRequestedRegion( inputRequestedRegion );
return;
}
else
{
// Couldn't crop the region (requested region is outside the largest
// possible region). Throw an exception.
// store what we tried to request (prior to trying to crop)
inputPtr->SetRequestedRegion( inputRequestedRegion );
// build an exception
InvalidRequestedRegionError e(__FILE__, __LINE__);
e.SetLocation(ITK_LOCATION);
e.SetDescription("Requested region is (at least partially) outside the largest possible region.");
e.SetDataObject(inputPtr);
throw e;
}
}
/**
* GenerateOutputInformation
*/
template <class TInputImage, class TOutputImage>
void
VectorExpandImageFilter<TInputImage,TOutputImage>
::GenerateOutputInformation()
{
// Call the superclass' implementation of this method
Superclass::GenerateOutputInformation();
// Get pointers to the input and output
InputImagePointer inputPtr =
const_cast< TInputImage * >( this->GetInput() );
OutputImagePointer outputPtr = this->GetOutput();
if ( !inputPtr || !outputPtr )
{
return;
}
// We need to compute the output spacing, the output image size, and the
// output image start index
const typename InputImageType::SpacingType&
inputSpacing = inputPtr->GetSpacing();
const typename TInputImage::SizeType& inputSize
= inputPtr->GetLargestPossibleRegion().GetSize();
const typename TInputImage::IndexType& inputStartIndex
= inputPtr->GetLargestPossibleRegion().GetIndex();
typename OutputImageType::SpacingType outputSpacing;
typename TOutputImage::SizeType outputSize;
typename TOutputImage::IndexType outputStartIndex;
for (unsigned int i = 0; i < TOutputImage::ImageDimension; i++)
{
outputSpacing[i] = inputSpacing[i] / (float) m_ExpandFactors[i];
outputSize[i] = (unsigned long)
((ExpandFactorsType)inputSize[i] * m_ExpandFactors[i]+
(ExpandFactorsType)0.5);
outputStartIndex[i] = (long)
((ExpandFactorsType)inputStartIndex[i] * m_ExpandFactors[i]+
(ExpandFactorsType)0.5);
}
outputPtr->SetSpacing( outputSpacing );
typename TOutputImage::RegionType outputLargestPossibleRegion;
outputLargestPossibleRegion.SetSize( outputSize );
outputLargestPossibleRegion.SetIndex( outputStartIndex );
outputPtr->SetLargestPossibleRegion( outputLargestPossibleRegion );
}
} // end namespace itk
#endif
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