File: itkFiniteDifferenceSparseImageFunction.h

package info (click to toggle)
insighttoolkit 3.6.0-3
  • links: PTS
  • area: main
  • in suites: lenny
  • size: 94,956 kB
  • ctags: 74,981
  • sloc: cpp: 355,621; ansic: 195,070; fortran: 28,713; python: 3,802; tcl: 1,996; sh: 1,175; java: 583; makefile: 415; csh: 184; perl: 175
file content (124 lines) | stat: -rw-r--r-- 5,359 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkFiniteDifferenceSparseImageFunction.h,v $
  Language:  C++
  Date:      $Date: 2003-09-10 14:29:07 $
  Version:   $Revision: 1.7 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkFiniteDifferenceSparseImageFunction_h_
#define __itkFiniteDifferenceSparseImageFunction_h_

#include "itkFiniteDifferenceFunction.h"

namespace itk {

/**
 * \class FiniteDifferenceSparseImageFunction
 *
 * \brief This is the base class for function classes that can be used with 
 * filters derived from FiniteDifferenceSparseImageFilter.
 *
 * \par This class is derived from FiniteDifferenceFunction. It is designed to
 *work with neighborhoods of pointers instead of actual data. Towards this
 *purpose ComputeUpdate method is no longer used and is replaced by the
 *ComputeSparseUpdate method. ComputeSparseUpdate assumes that the pointers are
 *associated with structures that have the member variable m_Data. The pointers
 *would normally originate from a SparseImage object.
 *
 * \par The PrecomputeSparseUpdate method can be defined to do a first pass of
 *computations which then can be used by ComputeSparseUpdate. If
 *PrecomputeSparseUpdate is used then the m_PrecomputeFlag should be set in the
 *FiniteDifferenceSparseImageFilter class. The precomputation step can be used
 *to speed up computation by avoiding repetitions. See the
 *NormalVectorDiffusionFunction for an example. 
 */
template <class TSparseImageType>
class ITK_EXPORT FiniteDifferenceSparseImageFunction
  :public FiniteDifferenceFunction <TSparseImageType>
{
public:
  /** Standard class typedef. */
  typedef FiniteDifferenceSparseImageFunction Self;
  typedef FiniteDifferenceFunction<TSparseImageType> Superclass;
  typedef SmartPointer<Self> Pointer;
  typedef SmartPointer<const Self> ConstPointer;

  /** Run-time type information (and related methods) */
  itkTypeMacro( FiniteDifferenceSparseImageFunction, FiniteDifferenceFunction );
   
  /** The image dimension. */
  itkStaticConstMacro(ImageDimension, unsigned int, Superclass::ImageDimension);
  
  /** Typedefs from the superclass. */
  typedef typename Superclass::PixelType        PixelType;
  typedef typename Superclass::TimeStepType     TimeStepType;
  typedef typename Superclass::RadiusType       RadiusType;
  typedef typename Superclass::NeighborhoodType NeighborhoodType;
  typedef typename Superclass::FloatOffsetType  FloatOffsetType;
  typedef typename Superclass::ImageType        SparseImageType;

  /** The index type for the sparse image. */
  typedef typename SparseImageType::IndexType   IndexType;

  /** The actual type of nodes stored the sparse image.*/
  typedef typename SparseImageType::NodeType NodeType;

  /** The type for the variables of NodeType. Scalar or vector. */
  typedef typename NodeType::NodeDataType    NodeDataType;
  
  /** This function is not called from the FiniteDifferenceSparseImageFilter
   *  class because we need to work with neighborhoods of pointers to data
   *  variables instead of neighborhoods of data directly. This function is
   *  replaced by the ComputeSparseUpdate function. */
  virtual PixelType ComputeUpdate(const NeighborhoodType&,
                                  void*,
                                  const FloatOffsetType&)
  {
    return static_cast<PixelType>(0);
  }

  /** The update called from the FiniteDifferenceSparseImageFilter. This
      function replaces the ComputeUpdate function. */
  virtual NodeDataType
  ComputeSparseUpdate(NeighborhoodType &neighborhood,
                      void *globalData,
                      const FloatOffsetType &offset = FloatOffsetType(0.0))
    const = 0;

  /** This function provides support for a 2 step update computation that
   *  avoids repetitive computation. FiniteDifferenceSparseImageFilter first
   *  calls this function for all active pixels in the SparseImage class, then
   *  calls ComputeSparseUpdate for the same set of pixels. This is used in
   *  NormalVectorDiffusionFunction to calculate flux variables which are then
   *  used to compute the updates. Intermediate variables such as the flux in
   *  the above examples are stored in the nodes of the SparseImage
   *  itself. Therefore, this function will have to know about the NodeType it
   *  is dealing with. This function does nothing by default. */
  virtual void PrecomputeSparseUpdate( NeighborhoodType& ) const {};

protected:
  FiniteDifferenceSparseImageFunction() {};
  ~FiniteDifferenceSparseImageFunction() {};
  void PrintSelf(std::ostream& os, Indent indent) const;
  
private:
  FiniteDifferenceSparseImageFunction(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented
};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkFiniteDifferenceSparseImageFunction.txx"
#endif

#endif