1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
|
/*=========================================================================
Program: Insight Segmentation & Registration Toolkit
Module: $RCSfile: itkBioGeneTest.cxx,v $
Language: C++
Date: $Date: 2003-09-10 14:30:02 $
Version: $Revision: 1.5 $
Copyright (c) Insight Software Consortium. All rights reserved.
See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#if defined(_MSC_VER)
#pragma warning ( disable : 4786 )
#endif
#include <iostream>
#include "itkBioGene.h"
int itkBioGeneTest( int, char * [] )
{
itk::bio::Gene cdk2;
std::string name = "Citosin Kinase";
cdk2.SetName( name );
// Testing SetName from char *
cdk2.SetName("Citosin Kinase");
std::string rname = cdk2.GetName();
if( rname != name )
{
std::cerr << "Error setting the name " << std::endl;
return EXIT_FAILURE;
}
// Testion copy method
itk::bio::Gene cdk4;
cdk4.Copy( cdk2 );
// Testing method for adding a protein domain
cdk2.AddProteinDomain( "SH2", 0.05 );
cdk2.AddProteinDomain( "SH3", 0.08 );
// This means that this gene will synthetize a protein
// having a domain that will bind to "SH2" domains with
// affinity 0.05, and having another domain that will
// bind to "SH3" domains with affinity 0.08.
// Testing method for adding a control domain
cdk2.AddGeneControlDomain( "SMAD", true );
cdk2.AddGeneControlDomain( "Arm", false );
// This means that this gene will be enabled by proteins
// having an affinity for "SMAD" domains, while it will
// be silenced (or repressed) by proteins having affinity
// for "Arm" domains.
// Test copy method when the source gene has domains
// defined.
cdk4.Copy( cdk2 );
std::cout << "Test Passed !" << std::endl;
return EXIT_SUCCESS;
}
|
