File: itkDanielssonDistanceMapImageFilterTest.cxx

package info (click to toggle)
insighttoolkit 3.6.0-3
  • links: PTS
  • area: main
  • in suites: lenny
  • size: 94,956 kB
  • ctags: 74,981
  • sloc: cpp: 355,621; ansic: 195,070; fortran: 28,713; python: 3,802; tcl: 1,996; sh: 1,175; java: 583; makefile: 415; csh: 184; perl: 175
file content (274 lines) | stat: -rw-r--r-- 7,294 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkDanielssonDistanceMapImageFilterTest.cxx,v $
  Language:  C++
  Date:      $Date: 2005-11-27 22:41:18 $
  Version:   $Revision: 1.16 $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#if defined(_MSC_VER)
#pragma warning ( disable : 4786 )
#endif

#include <itkImage.h>
#include <itkImageRegionIteratorWithIndex.h>
#include <itkImageSliceConstIteratorWithIndex.h>
#include <itkDanielssonDistanceMapImageFilter.h>


int itkDanielssonDistanceMapImageFilterTest(int, char* [] ) 
{
  
  std::cout << "Test ITK Danielsson Distance Map" << std::endl << std::endl;

  std::cout << "Compute the distance map of a 9x9 image" << std::endl;
  std::cout << "with a point at (4,4) (value=1)" << std::endl << std::endl;
  std::cout << "with a point at (1,6) (value=2)" << std::endl << std::endl;

  
  typedef itk::Image<float, 2>  myImageType2D1;
  typedef itk::Image<float, 2>  myImageType2D2;

  /* Allocate the 2D image */
  myImageType2D1::SizeType size2D = {{9,9}};
  myImageType2D1::IndexType index2D = {{0,0}};
  myImageType2D1::RegionType region2D;
  region2D.SetSize( size2D );
  region2D.SetIndex( index2D );

  myImageType2D1::Pointer inputImage2D = myImageType2D1::New();
  inputImage2D->SetLargestPossibleRegion( region2D );
  inputImage2D->SetBufferedRegion( region2D );
  inputImage2D->SetRequestedRegion( region2D );
  inputImage2D->Allocate();
  
  
  /* Set pixel (4,4) with the value 1 
   * and pixel (1,6) with the value 2 
   * The Danielsson Distance is performed for each pixel with a value > 0
   * The ClosestPoints computation is based on the value of the pixel.
   */

  typedef  itk::ImageRegionIteratorWithIndex<myImageType2D1> myIteratorType2D1;
  typedef  itk::ImageRegionIteratorWithIndex<myImageType2D2> myIteratorType2D2;

  myIteratorType2D1 it2D1(inputImage2D,region2D);

  // Set the image to 0
  while( !it2D1.IsAtEnd() ) 
  { 
    it2D1.Set( 0 );
    ++it2D1;
  }
 
  index2D[0] = 4;
  index2D[1] = 4;
  inputImage2D->SetPixel( index2D, 1);
  index2D[0] = 1;
  index2D[1] = 6;
  inputImage2D->SetPixel( index2D, 2);

  /* Create Danielsson Distance Map filter */
  typedef itk::DanielssonDistanceMapImageFilter< 
                                            myImageType2D1,
                                            myImageType2D2 > myFilterType2D;

  myFilterType2D::Pointer filter2D = myFilterType2D::New();

  filter2D->SetInput( inputImage2D ); 
  
  myImageType2D2::Pointer outputDistance2D = filter2D->GetOutput();
  myImageType2D1::Pointer outputVoronoi2D  = filter2D->GetVoronoiMap();

  myFilterType2D::VectorImageType::Pointer 
                    outputComponents = filter2D->GetVectorDistanceMap();

  filter2D->SetInputIsBinary(true); 
  filter2D->Update();

  /* Show Distance map */
  itk::ImageSliceConstIteratorWithIndex<myImageType2D2> it2D2( 
                                outputDistance2D,
                                outputDistance2D->GetRequestedRegion() );

  it2D2.GoToBegin();
  it2D2.SetFirstDirection ( 0 );
  it2D2.SetSecondDirection( 1 );

  while( !it2D2.IsAtEnd() ) 
  {
    while( !it2D2.IsAtEndOfSlice() ) 
    {
      while( !it2D2.IsAtEndOfLine() ) 
      {
        std::cout.width(5);
        std::cout << it2D2.Get() << "\t";
        ++it2D2;
      }
      std::cout << std::endl;
      it2D2.NextLine();
    }
    it2D2.NextSlice();
  }



  /* Show Closest Points map */
  std::cout << std::endl << std::endl;
  std::cout << "Voronoi Map Image 2D" << std::endl << std::endl;

  itk::ImageSliceConstIteratorWithIndex< myImageType2D2 > it2D3( 
                                outputVoronoi2D,
                                outputVoronoi2D->GetRequestedRegion() );

  it2D3.SetFirstDirection( 0 );
  it2D3.SetSecondDirection( 1 );
  
  while( !it2D3.IsAtEnd() ) 
  {
    while( !it2D3.IsAtEndOfSlice() ) 
    {
      while( !it2D3.IsAtEndOfLine() ) 
      {
        std::cout.width(5);
        std::cout << it2D3.Get() << "\t";
        ++it2D3;
      }
      std::cout << std::endl;
      it2D3.NextLine();
    }
    it2D3.NextSlice();
  }

  /* Show VectorsComponents Points map */
  std::cout << std::endl << std::endl;
  std::cout << "Components Map Image 2D" << std::endl << std::endl;

  itk::ImageSliceConstIteratorWithIndex< myFilterType2D::VectorImageType > it2D4( 
                                outputComponents,
                                outputComponents->GetRequestedRegion() );

  it2D4.SetFirstDirection( 0 );
  it2D4.SetSecondDirection( 1 );

  while( !it2D4.IsAtEnd() ) 
  {
    while( !it2D4.IsAtEndOfSlice() ) 
    {
      while( !it2D4.IsAtEndOfLine() ) 
      { 
        std::cout << "[" ;
        for (unsigned int i=0;i<2;i++)
        {
          std::cout << it2D4.Get()[i] ;
          if(i==0) 
          {
            std::cout << ",";
          }
        }
        std::cout << "]";
        std::cout << "\t" ;
        ++it2D4;

      }
      std::cout << std::endl;
      it2D4.NextLine();
    }
    it2D4.NextSlice();
  }


  /* Test Squared Distance functionality */
  myImageType2D2::IndexType index;
  index[0] = 0;
  index[1] = 0;
  const double distance1 = outputDistance2D->GetPixel( index );

  filter2D->SetSquaredDistance( true );
  filter2D->Update();

  const double distance2 = outputDistance2D->GetPixel( index );

  if( fabs( distance2 - distance1 * distance1 ) > 1e-5 )
    {
    std::cerr << "Error in use of the SetSquaredDistance() method" << std::endl;
    return EXIT_FAILURE;
    }


  /* Show Squared Distance map */
  std::cout << "Squared Distance Map " << std::endl;
  
  it2D2.GoToBegin();
  it2D2.SetFirstDirection ( 0 );
  it2D2.SetSecondDirection( 1 );

  while( !it2D2.IsAtEnd() ) 
  {
    while( !it2D2.IsAtEndOfSlice() ) 
    {
      while( !it2D2.IsAtEndOfLine() ) 
      {
        std::cout.width(5);
        std::cout << it2D2.Get() << "\t";
        ++it2D2;
      }
      std::cout << std::endl;
      it2D2.NextLine();
    }
    it2D2.NextSlice();
  }


  /* Test for images with anisotropic spacing */
  myImageType2D1::SpacingType anisotropicSpacing;

  anisotropicSpacing[0] = 1.0;
  anisotropicSpacing[1] = 5.0;

  inputImage2D->SetSpacing( anisotropicSpacing );

  inputImage2D->FillBuffer( 0 );

  index2D[0] = 4;
  index2D[1] = 4;
  inputImage2D->SetPixel( index2D, 1);

  filter2D->SetInput( inputImage2D ); 
  filter2D->SetInputIsBinary(true); 
  filter2D->Update();

  
  it2D2.GoToBegin();
  it2D2.SetFirstDirection ( 0 );
  it2D2.SetSecondDirection( 1 );

  while( !it2D2.IsAtEnd() ) 
  {
    while( !it2D2.IsAtEndOfSlice() ) 
    {
      while( !it2D2.IsAtEndOfLine() ) 
      {
        std::cout.width(5);
        std::cout << it2D2.Get() << "\t";
        ++it2D2;
      }
      std::cout << std::endl;
      it2D2.NextLine();
    }
    it2D2.NextSlice();
  }



  return EXIT_SUCCESS;

}