File: DicomSliceRead.py

package info (click to toggle)
insighttoolkit4 4.10.1-dfsg1-1.1
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 416,780 kB
  • ctags: 104,347
  • sloc: cpp: 553,142; ansic: 142,389; fortran: 34,788; python: 16,392; lisp: 2,070; sh: 1,862; tcl: 993; java: 362; perl: 200; makefile: 111; csh: 81; pascal: 69; xml: 19; ruby: 10
file content (50 lines) | stat: -rw-r--r-- 1,445 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
#==========================================================================
#
#   Copyright Insight Software Consortium
#
#   Licensed under the Apache License, Version 2.0 (the "License");
#   you may not use this file except in compliance with the License.
#   You may obtain a copy of the License at
#
#          http://www.apache.org/licenses/LICENSE-2.0.txt
#
#   Unless required by applicable law or agreed to in writing, software
#   distributed under the License is distributed on an "AS IS" BASIS,
#   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#   See the License for the specific language governing permissions and
#   limitations under the License.
#
#==========================================================================*/

#
#  Example on the use of DicomImageIO for reading a single DICOM slice, rescale
#  the intensities and save it in a different file format.
#

from InsightToolkit import *

from sys import argv

#
# Reads an image in  16bits/pixel
# and save it as      8bits/pixel
#
reader = itkImageFileReaderUS2_New()
writer = itkImageFileWriterUC2_New()

dicomIO = itkDicomImageIO_New()

reader.SetImageIO(dicomIO.GetPointer())

filter = itkRescaleIntensityImageFilterUS2UC2_New()

filter.SetOutputMinimum(0)
filter.SetOutputMaximum(255)

filter.SetInput(reader.GetOutput())
writer.SetInput(filter.GetOutput())

reader.SetFileName(argv[1])
writer.SetFileName(argv[2])

writer.Update()