1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
|
/*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkDTITubeSpatialObjectPoint_h
#define itkDTITubeSpatialObjectPoint_h
#include "itkTubeSpatialObjectPoint.h"
#include "itkDiffusionTensor3D.h"
#include "vnl/vnl_vector_fixed.h"
namespace itk
{
/** \class DTITubeSpatialObjectPoint
* \brief Point used for a tube definition
*
* This class contains all the functions necessary to define a point
* that can be used to build tubes.
*
* \sa DTITubeSpatialObject
* \ingroup ITKSpatialObjects
*/
template< unsigned int TPointDimension = 3 >
class ITK_TEMPLATE_EXPORT DTITubeSpatialObjectPoint:
public TubeSpatialObjectPoint< TPointDimension >
{
public:
typedef DTITubeSpatialObjectPoint Self;
typedef SpatialObjectPoint< TPointDimension > Superclass;
typedef Point< double, TPointDimension > PointType;
typedef Vector< double, TPointDimension > VectorType;
typedef CovariantVector< double, TPointDimension > CovariantVectorType;
typedef std::pair< std::string, float > FieldType;
typedef std::vector< FieldType > FieldListType;
// If you add a type here you need to modify the TranslateEnumToChar
// to translate the enum to a string
typedef enum { FA, ADC, GA } FieldEnumType;
/** Constructor. This one defines the number of dimensions in the
* DTITubeSpatialObjectPoint */
DTITubeSpatialObjectPoint();
/** Default destructor. */
virtual ~DTITubeSpatialObjectPoint() ITK_OVERRIDE;
/** Set/Get the tensor matrix */
void SetTensorMatrix(const DiffusionTensor3D< double > & matrix)
{
std::copy(matrix.Begin(), matrix.End(), m_TensorMatrix);
}
void SetTensorMatrix(const DiffusionTensor3D< float > & matrix)
{
std::copy(matrix.Begin(), matrix.End(), m_TensorMatrix);
}
void SetTensorMatrix(const float *matrix)
{
for ( unsigned int i = 0; i < 6; i++ )
{
m_TensorMatrix[i] = matrix[i];
}
}
const float * GetTensorMatrix() const { return m_TensorMatrix; }
/** Copy one DTITubeSpatialObjectPoint to another */
Self & operator=(const DTITubeSpatialObjectPoint & rhs);
/** Add a field to the point list */
void AddField(const char *name, float value);
/** Add a field to the point list */
void AddField(FieldEnumType name, float value);
/** Set a field value */
void SetField(FieldEnumType name, float value);
void SetField(const char *name, float value);
/** Return the list of extra fields */
const FieldListType & GetFields() const { return m_Fields; }
/** Return the value of the specific fiedls */
float GetField(const char *name) const;
float GetField(FieldEnumType name) const;
protected:
float m_TensorMatrix[6];
FieldListType m_Fields;
/** Print the object */
void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;
/** Translate the enum to char */
std::string TranslateEnumToChar(FieldEnumType name) const;
};
} // end of namespace itk
#ifndef ITK_MANUAL_INSTANTIATION
#include "itkDTITubeSpatialObjectPoint.hxx"
#endif
#endif // itkDTITubeSpatialObjectPoint_h
|
