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/*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#include "itkCurvatureFlowImageFilter.h"
#include "itkRandomImageSource.h"
#include "itkImageFileWriter.h"
#include "itkVTKImageIO.h"
#include "itkTextOutput.h"
#include "itkCastImageFilter.h"
#include "itkStreamingImageFilter.h"
namespace
{
// The following three classes are used to support callbacks
// on the filter in the pipeline that follows later
class ShowProgressObject
{
public:
ShowProgressObject(itk::ProcessObject* o)
{m_Process = o;}
void ShowProgress()
{std::cout << "Progress " << m_Process->GetProgress() << std::endl;}
itk::ProcessObject::Pointer m_Process;
};
}
namespace itk
{
// Dummy difference function for error testing
template <typename TImageType>
class DummyFunction : public FiniteDifferenceFunction<TImageType>
{
public:
typedef DummyFunction Self;
typedef FiniteDifferenceFunction<TImageType> Superclass;
typedef SmartPointer<Self> Pointer;
typedef SmartPointer<const Self> ConstPointer;
itkNewMacro(Self);
typedef typename Superclass::NeighborhoodType NeighborhoodType;
typedef typename Superclass::FloatOffsetType FloatOffsetType;
typedef typename Superclass::PixelType PixelType;
typedef typename Superclass::TimeStepType TimeStepType;
virtual PixelType ComputeUpdate( const NeighborhoodType &, void *,
const FloatOffsetType & ) ITK_OVERRIDE
{ return 0; }
virtual TimeStepType ComputeGlobalTimeStep( void * ) const ITK_OVERRIDE
{ return 0; }
virtual void *GetGlobalDataPointer() const ITK_OVERRIDE
{ return ITK_NULLPTR; }
virtual void ReleaseGlobalDataPointer(void *) const ITK_OVERRIDE {}
protected:
DummyFunction() {}
~DummyFunction() ITK_OVERRIDE {}
private:
ITK_DISALLOW_COPY_AND_ASSIGN(DummyFunction);
};
}
int itkCurvatureFlowTest(int argc, char* argv[] )
{
if( argc < 2 )
{
std::cerr << "Usage: " << std::endl;
std::cerr << argv[0] << " outputFile" << std::endl;
return EXIT_FAILURE;
}
itk::OutputWindow::SetInstance(itk::TextOutput::New().GetPointer());
typedef float PixelType;
enum { ImageDimension = 2 };
typedef itk::Image<PixelType, ImageDimension> ImageType;
//------------------------------------------------------------------------
std::cout << "Test error handling." << std::endl;
typedef itk::CurvatureFlowImageFilter<ImageType,ImageType> FilterType;
FilterType::Pointer filter = FilterType::New();
filter->SetInput( ITK_NULLPTR );
bool passed = false;
try
{
std::cout << "Test when input is ITK_NULLPTR." << std::endl;
filter->Update();
}
catch( itk::ExceptionObject& err )
{
std::cout << "Caught expected error." << std::endl;
std::cout << err << std::endl;
passed = true;
}
if ( !passed )
{
std::cout << "Test failed." << std::endl;
return EXIT_FAILURE;
}
// ---------------------------------------------------------------------------
try
{
std::cout << "Test when wrong function type." << std::endl;
typedef itk::DummyFunction<ImageType> FunctionType;
filter = FilterType::New();
FunctionType::Pointer function = FunctionType::New();
ImageType::Pointer dummy = ImageType::New();
ImageType::SizeType size;
size.Fill( 3 );
ImageType::RegionType region(size);
dummy->SetRegions( region );
dummy->Allocate();
dummy->FillBuffer( 0.2 );
filter->SetInput( dummy );
filter->SetNumberOfIterations( 2 );
filter->SetDifferenceFunction( function );
filter->Update();
}
catch( itk::ExceptionObject& err )
{
std::cout << "Caught expected error." << std::endl;
std::cout << err << std::endl;
}
//-----------------------------------------------------------------------
std::cout << "Create input image using RandomImageSource" << std::endl;
typedef itk::RandomImageSource<ImageType> SourceType;
SourceType::Pointer source = SourceType::New();
ImageType::SizeValueType size[ImageDimension] = {64,64};
source->SetSize( size );
source->SetMin(0.0);
source->SetMax(1.0);
source->Update();
std::cout << "Run CurvatureFlowImageFiler with progress cout's" << std::endl;
typedef itk::CurvatureFlowImageFilter<ImageType,ImageType> DenoiserType;
DenoiserType::Pointer denoiser = DenoiserType::New();
denoiser->SetInput( source->GetOutput() );
denoiser->SetTimeStep( 0.05 );
denoiser->SetNumberOfIterations( 8 );
ShowProgressObject progressWatch(denoiser);
itk::SimpleMemberCommand<ShowProgressObject>::Pointer command;
command = itk::SimpleMemberCommand<ShowProgressObject>::New();
command->SetCallbackFunction(&progressWatch,
&ShowProgressObject::ShowProgress);
denoiser->AddObserver( itk::ProgressEvent(), command);
denoiser->Update();
std::cout << "Run CurvatureFlowImageFilter using streamer" << std::endl;
typedef itk::CastImageFilter<ImageType,ImageType> CasterType;
CasterType::Pointer caster = CasterType::New();
caster->SetInput( denoiser->GetInput() );
DenoiserType::Pointer denoiser2 = DenoiserType::New();
denoiser2->SetInput( caster->GetOutput() );
denoiser2->SetTimeStep( denoiser->GetTimeStep() );
denoiser2->SetNumberOfIterations( denoiser->GetNumberOfIterations() );
typedef itk::StreamingImageFilter<ImageType,ImageType> StreamerType;
StreamerType::Pointer streamer = StreamerType::New();
streamer->SetInput( denoiser2->GetOutput() );
streamer->SetNumberOfStreamDivisions( 3 );
streamer->Update();
std::cout << "Compare stand-alone and streamer outputs" << std::endl;
typedef itk::ImageRegionIterator<ImageType> IteratorType;
IteratorType it1( denoiser->GetOutput(),
denoiser->GetOutput()->GetBufferedRegion() );
IteratorType it2( streamer->GetOutput(),
streamer->GetOutput()->GetBufferedRegion() );
bool testPass = true;
unsigned int failedPixels = 0;
while( !it1.IsAtEnd() )
{
if( itk::Math::NotAlmostEquals( it1.Get(), it2.Get() ) )
{
if (failedPixels == 0)
{
std::cout << "it1.Get() != it2.Get(): "
<< it1.Get() << " != " << it2.Get()
<< std::endl;
}
failedPixels++;
testPass = false;
}
++it1;
++it2;
}
if( !testPass )
{
std::cout << "Test failed." << std::endl;
std::cout << "Number of failed pixels: " << failedPixels << std::endl;
return EXIT_FAILURE;
}
// Exercise other member functions here
denoiser->Print( std::cout );
itk::VTKImageIO::Pointer vtkIO;
vtkIO = itk::VTKImageIO::New();
typedef itk::ImageFileWriter<ImageType> WriterType;
WriterType::Pointer writer = WriterType::New();
writer->SetInput( streamer->GetOutput() );
writer->SetFileName(argv[1]);
writer->SetImageIO(vtkIO);
writer->Write();
std::cout << "Test passed." << std::endl;
return EXIT_SUCCESS;
}
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