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/*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
/**
* Test program for GPUGradientAnisotropicDiffusionImageFilter class
*/
#include "itkImageFileReader.h"
#include "itkImageFileWriter.h"
#include "itkGradientAnisotropicDiffusionImageFilter.h"
#include "itkTimeProbe.h"
#include "itkImageRegionIterator.h"
#include "itkOpenCLUtil.h"
#include "itkGPUImage.h"
#include "itkGPUKernelManager.h"
#include "itkGPUContextManager.h"
#include "itkGPUImageToImageFilter.h"
#include "itkGPUGradientAnisotropicDiffusionImageFilter.h"
template< unsigned int VImageDimension >
int runGPUGradientAnisotropicDiffusionImageFilterTest(const std::string& inFile, const std::string& outFile)
{
typedef float InputPixelType;
typedef float OutputPixelType;
typedef itk::GPUImage< InputPixelType, VImageDimension > InputImageType;
typedef itk::GPUImage< OutputPixelType, VImageDimension > OutputImageType;
typedef itk::ImageFileReader< InputImageType > ReaderType;
typedef itk::ImageFileWriter< OutputImageType > WriterType;
typename ReaderType::Pointer reader = ReaderType::New();
typename WriterType::Pointer writer = WriterType::New();
reader->SetFileName( inFile );
writer->SetFileName( outFile );
// Create CPU/GPU anistorpic diffusion filter
typedef itk::GradientAnisotropicDiffusionImageFilter< InputImageType, OutputImageType > CPUAnisoDiffFilterType;
typedef itk::GPUGradientAnisotropicDiffusionImageFilter< InputImageType, OutputImageType > GPUAnisoDiffFilterType;
typename CPUAnisoDiffFilterType::Pointer CPUFilter = CPUAnisoDiffFilterType::New();
typename GPUAnisoDiffFilterType::Pointer GPUFilter = GPUAnisoDiffFilterType::New();
reader->Update();
// -------
// test 1~8 threads for CPU
std::vector<int> nThreadVec;
nThreadVec.push_back(1);
nThreadVec.push_back(2);
nThreadVec.push_back(4);
nThreadVec.push_back(8);
nThreadVec.push_back(128);
for(unsigned int idx = 0; idx < nThreadVec.size(); idx++)
{
int nThreads = nThreadVec[idx];
itk::TimeProbe cputimer;
cputimer.Start();
CPUFilter->SetNumberOfThreads( nThreads );
CPUFilter->SetInput( reader->GetOutput() );
CPUFilter->SetNumberOfIterations( 10 );
CPUFilter->SetTimeStep( 0.0625 );//125 );
CPUFilter->SetConductanceParameter( 3.0 );
CPUFilter->UseImageSpacingOn();
CPUFilter->Update();
cputimer.Stop();
std::cout << "CPU Anisotropic diffusion took " << cputimer.GetMean() << " seconds with "
<< CPUFilter->GetNumberOfThreads() << " threads.\n" << std::endl;
// -------
if (idx == nThreadVec.size()-1)
{
itk::TimeProbe gputimer;
gputimer.Start();
GPUFilter->SetInput( reader->GetOutput() );
GPUFilter->SetNumberOfIterations( 10 );
GPUFilter->SetTimeStep( 0.0625 );//125 );
GPUFilter->SetConductanceParameter( 3.0 );
GPUFilter->UseImageSpacingOn();
try
{
GPUFilter->Update();
}
catch (itk::ExceptionObject& excp)
{
std::cout << "Caught exception during GPUFilter->Update() " << excp << std::endl;
return EXIT_FAILURE;
}
try
{
GPUFilter->GetOutput()->UpdateBuffers(); // synchronization point
}
catch (itk::ExceptionObject& excp)
{
std::cout << "Caught exception during GPUFilter->GetOutput()->UpdateBuffers() " << excp << std::endl;
return EXIT_FAILURE;
}
gputimer.Stop();
std::cout << "GPU Anisotropic diffusion took " << gputimer.GetMean() << " seconds.\n" << std::endl;
// ---------------
// RMS Error check
// ---------------
double diff = 0;
unsigned int nPix = 0;
itk::ImageRegionIterator<OutputImageType> cit(CPUFilter->GetOutput(), CPUFilter->GetOutput()->GetLargestPossibleRegion());
itk::ImageRegionIterator<OutputImageType> git(GPUFilter->GetOutput(), GPUFilter->GetOutput()->GetLargestPossibleRegion());
for(cit.GoToBegin(), git.GoToBegin(); !cit.IsAtEnd(); ++cit, ++git)
{
double err = (double)(cit.Get()) - (double)(git.Get());
diff += err*err;
nPix++;
}
writer->SetInput( GPUFilter->GetOutput() ); // copy GPU->CPU implicilty
// execute pipeline filter and write output
writer->Update();
if (nPix > 0)
{
double RMSError = sqrt( diff / (double)nPix );
std::cout << "RMS Error : " << RMSError << std::endl;
double RMSThreshold = 2.5e-6;
if (itk::Math::isnan(RMSError))
{
std::cout << "RMS Error is NaN! nPix: " << nPix << std::endl;
return EXIT_FAILURE;
}
if (RMSError > RMSThreshold)
{
std::cout << "RMS Error exceeds threshold (" << RMSThreshold << ")" << std::endl;
return EXIT_FAILURE;
}
}
else
{
std::cout << "No pixels in output!" << std::endl;
return EXIT_FAILURE;
}
}
}
GPUFilter = ITK_NULLPTR; // explicit GPU object destruction test
itk::GPUContextManager::GetInstance()->DestroyInstance(); // GPUContextManager singleton destruction test
return EXIT_SUCCESS;
}
int itkGPUGradientAnisotropicDiffusionImageFilterTest(int argc, char *argv[])
{
if(!itk::IsGPUAvailable())
{
std::cerr << "OpenCL-enabled GPU is not present." << std::endl;
return EXIT_FAILURE;
}
if( argc < 3 )
{
std::cerr << "Error: missing arguments" << std::endl;
std::cerr << "inputfile outputfile [num_dimensions]" << std::endl;
return EXIT_FAILURE;
}
std::string inFile( argv[1] );
std::string outFile( argv[2] );
unsigned int dim = 3;
if( argc >= 4 )
{
dim = atoi( argv[3] );
}
if( dim == 2 )
{
return runGPUGradientAnisotropicDiffusionImageFilterTest<2>(inFile, outFile);
}
else if( dim == 3 )
{
return runGPUGradientAnisotropicDiffusionImageFilterTest<3>(inFile, outFile);
}
else
{
std::cerr << "Error: only 2 or 3 dimensions allowed, " << dim << " selected." << std::endl;
return EXIT_FAILURE;
}
}
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