File: itkInterpolateImageFilter.hxx

package info (click to toggle)
insighttoolkit4 4.13.3withdata-dfsg2-4
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 491,256 kB
  • sloc: cpp: 557,600; ansic: 180,546; fortran: 34,788; python: 16,572; sh: 2,187; lisp: 2,070; tcl: 993; java: 362; perl: 200; makefile: 133; csh: 81; pascal: 69; xml: 19; ruby: 10
file content (229 lines) | stat: -rw-r--r-- 7,226 bytes parent folder | download | duplicates (5)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkInterpolateImageFilter_hxx
#define itkInterpolateImageFilter_hxx

#include "itkInterpolateImageFilter.h"

#include "itkImageRegionIteratorWithIndex.h"
#include "itkProgressReporter.h"

namespace itk
{
/**
 * Constructor
 */
template< typename TInputImage, typename TOutputImage >
InterpolateImageFilter< TInputImage, TOutputImage >
::InterpolateImageFilter()
{
  // The filter requires two inputs
  this->SetNumberOfRequiredInputs(2);

  // Set default interpolator to linear
  typedef LinearInterpolateImageFunction< IntermediateImageType >
  LinearInterpolatorType;
  typename LinearInterpolatorType::Pointer interpolator =
    LinearInterpolatorType::New();

  m_Interpolator = static_cast< InterpolatorType * >( interpolator.GetPointer() );

  // Set default distance to 0,5
  m_Distance = 0.5;

  m_IntermediateImage = ITK_NULLPTR;
}

/**
 * Set the second image
 */
template< typename TInputImage, typename TOutputImage >
void
InterpolateImageFilter< TInputImage, TOutputImage >
::SetInput2(const InputImageType *image)
{
  // Process object is not const-correct so the const_cast is required here
  this->ProcessObject::SetNthInput( 1,
                                    const_cast< InputImageType * >( image ) );
}

/**
 * Get the second image
 */
template< typename TInputImage, typename TOutputImage >
const typename InterpolateImageFilter< TInputImage, TOutputImage >::InputImageType *
InterpolateImageFilter< TInputImage, TOutputImage >
::GetInput2()
{
  return static_cast< const TInputImage * >( this->ProcessObject::GetInput(1) );
}

/**
 * Print out a description of self
 */
template< typename TInputImage, typename TOutputImage >
void
InterpolateImageFilter< TInputImage, TOutputImage >
::PrintSelf(std::ostream & os, Indent indent) const
{
  this->Superclass::PrintSelf(os, indent);

  os << indent << "Interpolator: " << m_Interpolator.GetPointer() << std::endl;
  os << indent << "Distance: " << m_Distance << std::endl;
}

/**
 * Setup state of filter before multi-threading.
 * InterpolatorType::SetInputImage is not thread-safe and hence
 * has to be setup before ThreadedGenerateData
 */
template< typename TInputImage, typename TOutputImage >
void
InterpolateImageFilter< TInputImage, TOutputImage >
::BeforeThreadedGenerateData()
{
  if ( !m_Interpolator )
    {
    itkExceptionMacro(<< "Interpolator not set");
    }

  // Create intermediate image
  typedef typename IntermediateImageType::RegionType IntermediateImageRegionType;
  typedef typename TOutputImage::RegionType          ImageRegionType;

  ImageRegionType outputRegion = this->GetOutput()->GetRequestedRegion();

  IntermediateImageRegionType intermediateRegion;

  typedef ImageToImageFilterDetail::ImageRegionCopier< ImageDimension + 1, ImageDimension >
  RegionCopierType;
  RegionCopierType regionCopier;
  regionCopier(intermediateRegion, outputRegion);

  intermediateRegion.SetIndex(ImageDimension, 0);
  intermediateRegion.SetSize(ImageDimension, 2);

  m_IntermediateImage = IntermediateImageType::New();
  m_IntermediateImage->SetRegions(intermediateRegion);
  m_IntermediateImage->Allocate();

  // Fill intermediate image
  intermediateRegion.SetIndex(ImageDimension, 0);
  intermediateRegion.SetSize(ImageDimension, 1);

  ImageRegionConstIteratorWithIndex< TInputImage >      inIter(this->GetInput1(), outputRegion);
  ImageRegionIteratorWithIndex< IntermediateImageType > outIter(m_IntermediateImage,
                                                                intermediateRegion);

  while ( !inIter.IsAtEnd() )
    {
    outIter.Set( inIter.Get() );
    ++inIter;
    ++outIter;
    }

  intermediateRegion.SetIndex(ImageDimension, 1);
  intermediateRegion.SetSize(ImageDimension, 1);

  inIter = ImageRegionConstIteratorWithIndex< TInputImage >(this->GetInput2(), outputRegion);
  outIter = ImageRegionIteratorWithIndex< IntermediateImageType >(m_IntermediateImage,
                                                                  intermediateRegion);

  while ( !inIter.IsAtEnd() )
    {
    outIter.Set( inIter.Get() );
    ++inIter;
    ++outIter;
    }

  // Connect input image to interpolator
  m_Interpolator->SetInputImage(m_IntermediateImage);
}

/**
 * AfterThreadedGenerateData
 */
template< typename TInputImage, typename TOutputImage >
void
InterpolateImageFilter< TInputImage, TOutputImage >
::AfterThreadedGenerateData()
{
  // Clean up intermediate memory usage
  m_IntermediateImage = ITK_NULLPTR;
}

/**
 * ThreadedGenerateData
 */
template< typename TInputImage, typename TOutputImage >
void
InterpolateImageFilter< TInputImage, TOutputImage >
::ThreadedGenerateData(
  const OutputImageRegionType & outputRegionForThread,
  ThreadIdType threadId)
{
  // Get the output pointers
  OutputImagePointer outputPtr = this->GetOutput();

  // Create an iterator that will walk the output region for this thread.
  typedef ImageRegionIteratorWithIndex< TOutputImage > OutputIterator;

  OutputIterator outIt(outputPtr, outputRegionForThread);

  typedef typename TOutputImage::PixelType               OutputPixelType;
  typedef typename TOutputImage::IndexType               IndexType;
  typedef typename InterpolatorType::ContinuousIndexType ContinuousIndexType;

  IndexType outputIndex;                         // Index to current output
                                                 // pixel
  ContinuousIndexType intermediateIndex;         // Coordinates of current
                                                 // intermediate image pixel

  // Estimate total work for progress methods/callbacks
  ProgressReporter progress( this, threadId, outputRegionForThread.GetNumberOfPixels() );

  // Walk the output region
  while ( !outIt.IsAtEnd() )
    {
    // Determine the intermediate image index
    outputIndex = outIt.GetIndex();
    for ( unsigned int j = 0; j < ImageDimension; ++j )
      {
      intermediateIndex[j] = (double)outputIndex[j];
      }
    intermediateIndex[ImageDimension] = m_Distance;

    // Evaluate input at right position and copy to the output
    if ( m_Interpolator->IsInsideBuffer(intermediateIndex) )
      {
      outIt.Set( static_cast< OutputPixelType >(
                   m_Interpolator->EvaluateAtContinuousIndex(intermediateIndex) ) );
      }
    else
      {
      // should never be in here
      itkExceptionMacro(<< "Index not within the intermediate buffer");
      }

    ++outIt;
    progress.CompletedPixel();
    }
}
} // end namespace itk

#endif