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/*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#include "itkListSample.h"
#include "itkKdTreeGenerator.h"
#include <iostream>
#include <fstream>
int itkKdTreeTest2( int argc, char * argv [] )
{
if( argc < 4 )
{
std::cerr << "Missing argument" << std::endl;
std::cerr << "Usage: " << std::endl;
std::cerr << argv[0] << " pointsInputFile bucketSize graphvizDotOutputFile" << std::endl;
return EXIT_FAILURE;
}
const unsigned int Dimension = 2;
typedef float MeasurementValueType;
typedef itk::Vector< MeasurementValueType, Dimension > MeasurementVectorType;
typedef itk::Statistics::ListSample< MeasurementVectorType > SampleType;
SampleType::Pointer sample = SampleType::New();
sample->SetMeasurementVectorSize( Dimension );
MeasurementVectorType mv;
MeasurementVectorType queryPoint;
std::ifstream pntFile;
pntFile.open( argv[1], std::ios_base::in|std::ios_base::binary );
pntFile >> mv[0] >> mv[1];
do
{
sample->PushBack( mv );
pntFile >> mv[0] >> mv[1];
}
while( !pntFile.eof() );
pntFile.close();
typedef itk::Statistics::KdTreeGenerator< SampleType > TreeGeneratorType;
TreeGeneratorType::Pointer treeGenerator = TreeGeneratorType::New();
const unsigned int bucketSize = atoi( argv[2] );
treeGenerator->SetSample( sample );
treeGenerator->SetBucketSize( bucketSize );
treeGenerator->Update();
typedef TreeGeneratorType::KdTreeType TreeType;
bool testFailed = false;
TreeType::Pointer tree = treeGenerator->GetOutput();
typedef itk::Statistics::EuclideanDistanceMetric< MeasurementVectorType >
DistanceMetricType;
DistanceMetricType::Pointer distanceMetric = DistanceMetricType::New();
DistanceMetricType::OriginType origin( Dimension );
//
// Print out the tree structure to the console
//
tree->PrintTree( std::cout );
for( unsigned int k = 0; k < sample->Size(); k++ )
{
queryPoint = sample->GetMeasurementVector(k);
for ( unsigned int i = 0; i < sample->GetMeasurementVectorSize(); ++i )
{
origin[i] = queryPoint[i];
}
std::cout << "----------------------------------" << std::endl;
std::cout << "Origin = " << origin << std::endl;
distanceMetric->SetOrigin( origin );
unsigned int numberOfNeighbors = 1;
TreeType::InstanceIdentifierVectorType neighbors;
tree->Search( queryPoint, numberOfNeighbors, neighbors );
std::cout << "kd-tree knn search result:" << std::endl
<< "query point = [" << queryPoint << "]" << std::endl
<< "k = " << numberOfNeighbors << std::endl;
std::cout << "measurement vector : distance" << std::endl;
for ( unsigned int i = 0; i < numberOfNeighbors; ++i )
{
const double distance =
distanceMetric->Evaluate( tree->GetMeasurementVector( neighbors[i] ));
std::cout << "[" << tree->GetMeasurementVector( neighbors[i] )
<< "] : "
<< distance << std::endl;
if( distance > itk::Math::eps )
{
testFailed = true;
}
}
}
//
// Plot out the tree structure to the console in the format used by Graphviz dot
//
std::ofstream plotFile;
plotFile.open( argv[3] );
tree->PlotTree( plotFile );
plotFile.close();
if( testFailed )
{
std::cerr << "Incorrect distance was found" << std::endl;
return EXIT_FAILURE;
}
return EXIT_SUCCESS;
}
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