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/*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#include <iostream>
#include "itkBioGene.h"
int itkBioGeneTest( int, char * [] )
{
itk::bio::Gene cdk2;
std::string name = "Citosin Kinase";
cdk2.SetName( name );
// Testing SetName from char *
cdk2.SetName("Citosin Kinase");
std::string rname = cdk2.GetName();
if( rname != name )
{
std::cerr << "Error setting the name " << std::endl;
return EXIT_FAILURE;
}
// Testion copy method
itk::bio::Gene cdk4;
cdk4.Copy( cdk2 );
// Testing method for adding a protein domain
cdk2.AddProteinDomain( "SH2", 0.05 );
cdk2.AddProteinDomain( "SH3", 0.08 );
// This means that this gene will synthetize a protein
// having a domain that will bind to "SH2" domains with
// affinity 0.05, and having another domain that will
// bind to "SH3" domains with affinity 0.08.
// Testing method for adding a control domain
cdk2.AddGeneControlDomain( "SMAD", true );
cdk2.AddGeneControlDomain( "Arm", false );
// This means that this gene will be enabled by proteins
// having an affinity for "SMAD" domains, while it will
// be silenced (or repressed) by proteins having affinity
// for "Arm" domains.
// Test copy method when the source gene has domains
// defined.
cdk4.Copy( cdk2 );
std::cout << "Test Passed !" << std::endl;
return EXIT_SUCCESS;
}
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