File: itkCurvatureFlowTestPython2.py

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#==========================================================================
#
#   Copyright Insight Software Consortium
#
#   Licensed under the Apache License, Version 2.0 (the "License");
#   you may not use this file except in compliance with the License.
#   You may obtain a copy of the License at
#
#          http://www.apache.org/licenses/LICENSE-2.0.txt
#
#   Unless required by applicable law or agreed to in writing, software
#   distributed under the License is distributed on an "AS IS" BASIS,
#   WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#   See the License for the specific language governing permissions and
#   limitations under the License.
#
#==========================================================================*/

from InsightToolkit import *
import itkTesting

import sys
import os
import shutil

basename = os.path.basename(sys.argv[0])
name = os.path.splitext(basename)[0]
dir = "Algorithms"


testInput = itkTesting.ITK_TEST_INPUT
testOutput = itkTesting.ITK_TEST_OUTPUT
baseLine = itkTesting.ITK_TEST_BASELINE


reader = itkImageFileReaderF2_New()
reader.SetFileName(testInput + "/cthead1.png")


cf = itkCurvatureFlowImageFilterF2F2_New()
cf.SetInput(reader.GetOutput())
cf.SetTimeStep(0.25)
cf.SetNumberOfIterations(10)


cfss = itkShiftScaleImageFilterF2US2_New()
cfss.SetInput(cf.GetOutput())
cfss.SetShift(0.7)
cfss.SetScale(0.9)


valid = itkImageFileReaderUS2_New()
valid.SetFileName(baseLine + "/" + dir + "/" + name + ".png")


diff = itkDifferenceImageFilterUS2_New()
diff.SetValidInput(valid.GetOutput())
diff.SetTestInput(cfss.GetOutput())
diff.SetToleranceRadius(1)
diff.SetDifferenceThreshold(0)

diff.Update()


meanDiff = diff.GetMeanDifference()
totalDiff = diff.GetTotalDifference()


print("MeanDifference  = ", meanDiff)
print("TotalDifference = ", totalDiff)


print ("<DartMeasurement name=\"MeanDifference\" type=\"numeric/double\">",
       meanDiff, "</DartMeasurement>")
print ("<DartMeasurement name=\"TotalDifference\" type=\"numeric/double\">",
       totalDiff, "</DartMeasurement>")

if (meanDiff > 0.1):
    convert = itkCastImageFilterUS2UC2_New()
    rescale = itkRescaleIntensityImageFilterUS2UC2_New()
    rescale.SetInput(diff.GetOutput())
    rescale.SetOutputMinimum(0)
    rescale.SetOutputMaximum(255)

    io = itkPNGImageIO_New()
    io.SetUseCompression(1)
    io.SetCompressionLevel(9)

    writer = itkImageFileWriterUC2_New()
    writer.SetImageIO(io.GetPointer())
    writer.SetInput(convert.GetOutput())

    writer.SetFileName(testOutput + "/" + name + ".test.png")
    convert.SetInput(cfss.GetOutput())
    writer.Write()

    writer.SetFileName(testOutput + "/" + name + ".diff.png")
    writer.SetInput(rescale.GetOutput())
    writer.Write()

    shutil.copyfile(
        baseLine +
        "/" +
        dir +
        "/" +
        name +
        ".png",
        testOutput +
        "/" +
        name +
        ".valid.png")

    print ("<DartMeasurementFile name=\"TestImage\" type=\"image/png\">" +
           testOutput + "/" + name + ".test.png</DartMeasurementFile>")
    print ("<DartMeasurementFile name=\"DifferenceImage\" type=\"image/png\">"
           + testOutput + "/" + name + ".diff.png</DartMeasurementFile>")
    print ("<DartMeasurementFile name=\"ValidImage\" type=\"image/png\">" +
           testOutput + "/" + name + ".valid.png</DartMeasurementFile>")
    pr = "<DartMeasurement name=\"DifferenceShift\" type=\"numeric/double\">"
    print (pr, rescale.GetShift(), "</DartMeasurement>")
    pr = "<DartMeasurement name=\"DifferenceScale\" type=\"numeric/double\">"
    print (pr, rescale.GetScale(), "</DartMeasurement>")

#  return 1



# return 0