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/*=========================================================================
*
* Copyright NumFOCUS
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* https://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#include <iostream>
#include "itkImage.h"
#include "itkFixedArray.h"
#include "itkImageAlgorithm.h"
#include "itkTransform.h"
template <unsigned int InputDimension>
class TestTransform
{
public:
using InputPointType = itk::Point<double, InputDimension>;
using OutputPointType = itk::Point<double, 2>;
OutputPointType
TransformPoint(const InputPointType & inputPoint) const
{
OutputPointType outputPoint;
outputPoint.Fill(0.0);
// if InputPoint Dimension < 2 then embed point in 2D space
// else project the point to 2D space.
for (unsigned int d = 0; d < std::min(inputPoint.GetPointDimension(), outputPoint.GetPointDimension()); ++d)
{
outputPoint[d] = inputPoint[d];
}
return outputPoint;
}
};
int
itkImageTest(int, char *[])
{
using Image = itk::Image<float, 2>;
auto image = Image::New();
Image::ConstPointer myconstptr = image;
image->DebugOn();
const char * const knownStringName = "My First Image For Testing.";
image->SetObjectName(knownStringName);
if (std::string(knownStringName) != image->GetObjectName())
{
std::cerr << "ERROR: Object name not set and recovered correctly.\n"
<< std::string(knownStringName) << " != " << image->GetObjectName() << std::endl;
return EXIT_FAILURE;
}
image->GetSource();
image->DisconnectPipeline();
Image::SpacingType spacing;
spacing.Fill(1.0);
Image::PointType origin;
origin.Fill(1.0);
Image::DirectionType direction;
direction[0][0] = .5;
direction[0][1] = .7;
direction[1][0] = .7;
direction[1][1] = .5;
image->SetSpacing(spacing);
image->SetOrigin(origin);
image->SetDirection(direction);
double dspacing[Image::ImageDimension] = { 2.0, 2.0 };
double dorigin[Image::ImageDimension] = { 2.0, 2.0 };
image->SetSpacing(dspacing);
image->SetOrigin(dorigin);
float fspacing[Image::ImageDimension] = { 3.0, 3.0 };
float forigin[Image::ImageDimension] = { 3.0, 3.0 };
image->SetSpacing(fspacing);
image->SetOrigin(forigin);
// test inverse direction
std::cout << "Test inverse direction." << std::endl;
Image::DirectionType product;
product = direction * image->GetInverseDirection();
double eps = 1e-06;
if (itk::Math::abs(product[0][0] - 1.0) > eps || itk::Math::abs(product[1][1] - 1.0) > eps ||
itk::Math::abs(product[0][1]) > eps || itk::Math::abs(product[1][0]) > eps)
{
std::cerr << "Inverse direction test failed: "
<< "direction * inverse: " << product << std::endl;
return EXIT_FAILURE;
}
std::cout << "Test transform to/from physical vector." << std::endl;
using GradientType = itk::FixedArray<float, 2>;
GradientType truthGradient, outputGradient, testGradient;
truthGradient[0] = 1.0;
truthGradient[1] = 1.0;
image->TransformLocalVectorToPhysicalVector(truthGradient, outputGradient);
image->TransformPhysicalVectorToLocalVector(outputGradient, testGradient);
if (itk::Math::abs(truthGradient[0] - testGradient[0]) > eps ||
itk::Math::abs(truthGradient[1] - testGradient[1]) > eps)
{
std::cerr << "Transform to/from PhysicalVector test failed: "
<< "truthGradient: " << truthGradient << std::endl
<< "testGradient: " << testGradient << std::endl;
return EXIT_FAILURE;
}
std::cout << "Test GetSmallestRegionContainingRegion." << std::endl;
image->SetSpacing(spacing);
origin.Fill(1.2);
image->SetOrigin(origin);
direction.SetIdentity();
image->SetDirection(direction);
Image::RegionType region;
Image::IndexType index;
index.Fill(0);
Image::SizeType size;
size.Fill(4);
region.SetIndex(index);
region.SetSize(size);
image->SetRegions(region);
auto imageRef = Image::New();
Image::SpacingType spacingRef;
spacingRef.Fill(2);
Image::PointType originRef;
originRef.Fill(0);
Image::DirectionType directionRef;
directionRef.SetIdentity();
imageRef->SetSpacing(spacingRef);
imageRef->SetOrigin(originRef);
imageRef->SetDirection(directionRef);
Image::RegionType regionRef;
Image::IndexType indexRef;
Image::SizeType sizeRef;
indexRef.Fill(0);
sizeRef.Fill(5);
regionRef.SetIndex(indexRef);
regionRef.SetSize(sizeRef);
imageRef->SetRegions(regionRef);
using TransformType = itk::Transform<double, Image::ImageDimension, Image::ImageDimension>;
Image::RegionType boxRegion = itk::ImageAlgorithm::EnlargeRegionOverBox(image->GetLargestPossibleRegion(),
image.GetPointer(),
imageRef.GetPointer(),
static_cast<TransformType *>(nullptr));
Image::IndexType correctIndex;
correctIndex.Fill(0);
Image::SizeType correctSize;
correctSize.Fill(3);
if (!(boxRegion.GetIndex() == correctIndex) || !(boxRegion.GetSize() == correctSize))
{
std::cerr << "EnlargeRegionOverBox test failed: "
<< "boxRegion: " << boxRegion << std::endl;
return EXIT_FAILURE;
}
using Image3D = itk::Image<float, 3>;
auto volume = Image3D::New();
Image3D::SpacingType spacingVol;
spacingVol.Fill(1);
Image3D::PointType originVol;
originVol.Fill(0);
Image3D::DirectionType directionVol;
directionVol.SetIdentity();
volume->SetSpacing(spacingVol);
volume->SetOrigin(originVol);
volume->SetDirection(directionVol);
Image3D::RegionType cuboid;
Image3D::IndexType indexCuboid;
indexCuboid.Fill(0);
Image3D::SizeType sizeCuboid;
sizeCuboid[0] = 1;
sizeCuboid[1] = 2;
sizeCuboid[2] = 3;
cuboid.SetIndex(indexCuboid);
cuboid.SetSize(sizeCuboid);
volume->SetRegions(cuboid);
using ProjectionTransformType = TestTransform<Image3D::ImageDimension>;
ProjectionTransformType * projectionTransform = new ProjectionTransformType;
Image::RegionType rectangleRegion = itk::ImageAlgorithm::EnlargeRegionOverBox(
volume->GetLargestPossibleRegion(), volume.GetPointer(), imageRef.GetPointer(), projectionTransform);
delete projectionTransform;
Image::IndexType correctRectangleIndex;
correctRectangleIndex.Fill(0);
Image::SizeType correctRectangleSize;
correctRectangleSize[0] = 1;
correctRectangleSize[1] = 2;
if (!(rectangleRegion.GetIndex() == correctRectangleIndex) || !(rectangleRegion.GetSize() == correctRectangleSize))
{
std::cerr << "EnlargeRegionOverBox test for projecting transform failed: "
<< "rectangle Region: " << rectangleRegion << std::endl;
return EXIT_FAILURE;
}
using TestIdentityTransformType = TestTransform<Image::ImageDimension>;
TestIdentityTransformType * testIdentityTransform = new TestIdentityTransformType;
Image::RegionType tesBoxRegion = itk::ImageAlgorithm::EnlargeRegionOverBox(
image->GetLargestPossibleRegion(), image.GetPointer(), imageRef.GetPointer(), testIdentityTransform);
delete testIdentityTransform;
if (!(tesBoxRegion.GetIndex() == correctIndex) || !(tesBoxRegion.GetSize() == correctSize))
{
std::cerr << "EnlargeRegionOverBox test for test Identity failed: "
<< "rectangle Region: " << tesBoxRegion << std::endl;
return EXIT_FAILURE;
}
std::cout << "Print: " << std::endl;
image->Print(std::cout);
std::cout << "Test Graft." << std::endl;
image->Graft(imageRef);
if (image->GetPixelContainer() != imageRef->GetPixelContainer())
{
std::cerr << "Graft test failed." << std::endl;
return EXIT_FAILURE;
}
return (EXIT_SUCCESS);
}
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