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/*=========================================================================
*
* Copyright NumFOCUS
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* https://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkVectorImageToImageAdaptor_h
#define itkVectorImageToImageAdaptor_h
#include "itkImageAdaptor.h"
#include "itkVectorImage.h"
namespace itk
{
namespace Accessor
{
/**
* \class VectorImageToImagePixelAccessor
* \brief Extract components from a VectorImage.
*
* This accessor is used to extract components from a VectorImage. It is used
* from VectorImageComponentExtractAdaptor. The component to extract is set
* using SetExtractComponentIdx.
*
* \note
* This work is part of the National Alliance for Medical Image Computing
* (NAMIC), funded by the National Institutes of Health through the NIH Roadmap
* for Medical Research, Grant U54 EB005149.
* \deprecated Please use the more generic NthElementImageAdaptor.
*
* \sa NthElementImageAdaptor
*
* \ingroup ImageAdaptors
* \ingroup ITKImageAdaptors
*/
template <typename TType>
class VectorImageToImagePixelAccessor : private DefaultVectorPixelAccessor<TType>
{
public:
using VectorLengthType = unsigned int;
/** External type alias. It defines the external aspect
* that this class will exhibit. */
using ExternalType = TType;
/** Internal type alias used by the ImageAdaptor for the buffer pointer */
using InternalType = TType;
using ActualPixelType = VariableLengthVector<TType>;
inline void
Set(ActualPixelType output, const ExternalType & input) const
{
output[m_ComponentIdx] = input;
}
inline void
Set(InternalType & output, const ExternalType & input, const SizeValueType offset) const
{
return Set(Superclass::Get(output, offset), input);
}
inline ExternalType
Get(const ActualPixelType & input) const
{
ExternalType output;
output = input[m_ComponentIdx];
return output;
}
inline ExternalType
Get(const InternalType & input, const SizeValueType offset) const
{
return Get(Superclass::Get(input, offset));
}
void
SetExtractComponentIdx(VectorLengthType idx)
{
m_ComponentIdx = idx;
}
VectorLengthType
GetExtractComponentIdx() const
{
return m_ComponentIdx;
}
/** Set the length of each vector in the VectorImage */
void
SetVectorLength(VectorLengthType l)
{
Superclass::SetVectorLength(l);
}
/** Get Vector lengths */
VectorLengthType
GetVectorLength() const
{
return Superclass::GetVectorLength();
}
VectorImageToImagePixelAccessor(unsigned int length = 1) { Superclass::SetVectorLength(length); }
protected:
using Superclass = DefaultVectorPixelAccessor<TType>;
private:
VectorLengthType m_ComponentIdx{ 0 };
};
} // end namespace Accessor
/**
* \class VectorImageToImageAdaptor
* \brief Presents a VectorImage and extracts a component from it into an image.
*
* The class is expected to be templated over a pixel type and dimension. These
* are the pixel types and dimension of the VectorImage.
*
* The component to extract is set with SetExtractComponentIdx() method.
*
* \note
* This work is part of the National Alliance for Medical Image Computing
* (NAMIC), funded by the National Institutes of Health through the NIH Roadmap
* for Medical Research, Grant U54 EB005149.
*
* \ingroup ImageAdaptors
*
* \ingroup ITKImageAdaptors
*
* \sphinx
* \sphinxexample{Core/ImageAdaptors/ViewComponentVectorImageAsScaleImage,View Component Vector Image As Scalar Image}
* \endsphinx
*/
template <typename TPixelType, unsigned int Dimension>
class VectorImageToImageAdaptor
: public ImageAdaptor<VectorImage<TPixelType, Dimension>, Accessor::VectorImageToImagePixelAccessor<TPixelType>>
{
public:
ITK_DISALLOW_COPY_AND_MOVE(VectorImageToImageAdaptor);
/** Standard class type aliases. */
using Self = VectorImageToImageAdaptor;
using VectorImageType = VectorImage<TPixelType, Dimension>;
using Superclass = ImageAdaptor<VectorImageType, Accessor::VectorImageToImagePixelAccessor<TPixelType>>;
using Pointer = SmartPointer<Self>;
using ConstPointer = SmartPointer<const Self>;
/** Method for creation through the object factory. */
itkNewMacro(Self);
/** \see LightObject::GetNameOfClass() */
itkOverrideGetNameOfClassMacro(VectorImageToImageAdaptor);
/** PixelContainer type alias support Used to construct a container for
* the pixel data. */
using typename Superclass::PixelContainer;
using typename Superclass::PixelContainerPointer;
using typename Superclass::PixelContainerConstPointer;
using typename Superclass::IOPixelType;
/** Typedef for the length of vectors in the VectorImage. */
using VectorLengthType = typename VectorImageType::VectorLengthType;
// Set/GetMethods to set the component to be extracted.
void
SetExtractComponentIndex(VectorLengthType componentIdx)
{
this->GetPixelAccessor().SetExtractComponentIdx(componentIdx);
}
// Set/GetMethods to set the component to be extracted.
VectorLengthType
GetExtractComponentIndex() const
{
return this->GetPixelAccessor().GetExtractComponentIdx();
}
protected:
VectorImageToImageAdaptor() = default;
~VectorImageToImageAdaptor() override = default;
};
} // end namespace itk
#endif
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