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/*=========================================================================
*
* Copyright NumFOCUS
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* https://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkMetaMeshConverter_hxx
#define itkMetaMeshConverter_hxx
#include "itkTetrahedronCell.h"
#include "itkPolygonCell.h"
#include "itkHexahedronCell.h"
#include "itkQuadraticTriangleCell.h"
#include <list>
namespace itk
{
template <unsigned int VDimension, typename PixelType, typename TMeshTraits>
auto
MetaMeshConverter<VDimension, PixelType, TMeshTraits>::CreateMetaObject() -> MetaObjectType *
{
return dynamic_cast<MetaObjectType *>(new MeshMetaObjectType);
}
/** Convert a metaMesh into an Mesh SpatialObject */
template <unsigned int VDimension, typename PixelType, typename TMeshTraits>
auto
MetaMeshConverter<VDimension, PixelType, TMeshTraits>::MetaObjectToSpatialObject(const MetaObjectType * mo)
-> SpatialObjectPointer
{
const auto * _mesh = dynamic_cast<const MeshMetaObjectType *>(mo);
if (_mesh == nullptr)
{
itkExceptionMacro("Can't convert MetaObject to MetaMesh");
}
auto meshSO = MeshSpatialObjectType::New();
meshSO->GetProperty().SetName(_mesh->Name());
meshSO->SetId(_mesh->ID());
meshSO->SetParentId(_mesh->ParentID());
meshSO->GetProperty().SetRed(_mesh->Color()[0]);
meshSO->GetProperty().SetGreen(_mesh->Color()[1]);
meshSO->GetProperty().SetBlue(_mesh->Color()[2]);
meshSO->GetProperty().SetAlpha(_mesh->Color()[3]);
// Create a new Mesh
auto mesh = MeshType::New();
// Add Points
using PointListType = typename MeshMetaObjectType::PointListType;
const PointListType points = _mesh->GetPoints();
auto it_points = points.begin();
while (it_points != points.end())
{
typename MeshType::PointType pt;
for (unsigned int i = 0; i < VDimension; ++i)
{
pt[i] = ((*it_points)->m_X)[i] * _mesh->ElementSpacing(i);
}
mesh->SetPoint((*it_points)->m_Id, pt);
++it_points;
}
// Add Cells
using CellType = typename MeshType::CellType;
using CellAutoPointer = typename CellType::CellAutoPointer;
mesh->SetCellsAllocationMethod(MeshEnums::MeshClassCellsAllocationMethod::CellsAllocatedDynamicallyCellByCell);
for (unsigned int celltype = 0; celltype < MET_NUM_CELL_TYPES; ++celltype)
{
using CellListType = typename MetaMesh::CellListType;
const CellListType cells = _mesh->GetCells((MET_CellGeometry)celltype);
auto it_cells = cells.begin();
using CellInterfaceType = typename MeshType::CellType;
using VertexCellType = itk::VertexCell<CellInterfaceType>;
using LineCellType = itk::LineCell<CellInterfaceType>;
using TriangleCellType = itk::TriangleCell<CellInterfaceType>;
using QuadrilateralCellType = itk::QuadrilateralCell<CellInterfaceType>;
using PolygonCellType = itk::PolygonCell<CellInterfaceType>;
using TetraCellType = itk::TetrahedronCell<CellInterfaceType>;
using HexahedronCellType = itk::HexahedronCell<CellInterfaceType>;
using QuadraticEdgeCellType = itk::QuadraticEdgeCell<CellInterfaceType>;
using QuadraticTriangleCellType = itk::QuadraticTriangleCell<CellInterfaceType>;
while (it_cells != cells.end())
{
CellAutoPointer cell;
switch ((MET_CellGeometry)celltype)
{
case MET_VERTEX_CELL:
cell.TakeOwnership(new VertexCellType);
break;
case MET_LINE_CELL:
cell.TakeOwnership(new LineCellType);
break;
case MET_TRIANGLE_CELL:
cell.TakeOwnership(new TriangleCellType);
break;
case MET_QUADRILATERAL_CELL:
cell.TakeOwnership(new QuadrilateralCellType);
break;
case MET_POLYGON_CELL:
cell.TakeOwnership(new PolygonCellType);
break;
case MET_TETRAHEDRON_CELL:
cell.TakeOwnership(new TetraCellType);
break;
case MET_HEXAHEDRON_CELL:
cell.TakeOwnership(new HexahedronCellType);
break;
case MET_QUADRATIC_EDGE_CELL:
cell.TakeOwnership(new QuadraticEdgeCellType);
break;
case MET_QUADRATIC_TRIANGLE_CELL:
cell.TakeOwnership(new QuadraticTriangleCellType);
break;
default:
cell.TakeOwnership(new VertexCellType);
}
for (unsigned int i = 0; i < MET_CellSize[celltype]; ++i)
{
cell->SetPointId(i, (*it_cells)->m_PointsId[i]);
}
mesh->SetCell((*it_cells)->m_Id, cell);
++it_cells;
}
}
// Add cell links
using CellLinkListType = typename MetaMesh::CellLinkListType;
const CellLinkListType links = _mesh->GetCellLinks();
auto it_links = links.begin();
using CellLinksContainerType = typename MeshType::CellLinksContainer;
auto linkContainer = CellLinksContainerType::New();
while (it_links != links.end())
{
typename MeshType::PointCellLinksContainer pcl;
std::list<int>::const_iterator it_link = (*it_links)->m_Links.begin();
while (it_link != (*it_links)->m_Links.end())
{
pcl.insert(*it_link);
++it_link;
}
linkContainer->InsertElement((*it_links)->m_Id, pcl);
++it_links;
}
mesh->SetCellLinks(linkContainer);
// Add point data
using PointDataContainer = typename MeshType::PointDataContainer;
auto pointData = PointDataContainer::New();
auto it_pd = _mesh->GetPointData().begin();
while (it_pd != _mesh->GetPointData().end())
{
pointData->InsertElement((*it_pd)->m_Id, static_cast<MeshData<PixelType> *>(*it_pd)->m_Data);
++it_pd;
}
mesh->SetPointData(pointData);
// Add cell data
using CellDataContainer = typename MeshType::CellDataContainer;
auto cellData = CellDataContainer::New();
auto it_cd = _mesh->GetCellData().begin();
while (it_cd != _mesh->GetCellData().end())
{
using CellPixelType = typename MeshType::CellPixelType;
cellData->InsertElement((*it_cd)->m_Id, static_cast<MeshData<CellPixelType> *>(*it_cd)->m_Data);
++it_cd;
}
mesh->SetCellData(cellData);
// Add the mesh
meshSO->SetMesh(mesh);
return meshSO.GetPointer();
}
/** Convert a Mesh SpatialObject into a metaMesh */
template <unsigned int VDimension, typename PixelType, typename TMeshTraits>
auto
MetaMeshConverter<VDimension, PixelType, TMeshTraits>::SpatialObjectToMetaObject(const SpatialObjectType * so)
-> MetaObjectType *
{
const MeshSpatialObjectConstPointer meshSO = dynamic_cast<const MeshSpatialObjectType *>(so);
if (meshSO.IsNull())
{
itkExceptionMacro("Can't downcast SpatialObject to MeshSpatialObject");
}
auto * metamesh = new MeshMetaObjectType(VDimension);
typename MeshType::ConstPointer mesh = meshSO->GetMesh();
if (!mesh)
{
std::cout << "MetaMeshConverter : GetMesh() returned a nullptr Pointer" << std::endl;
return nullptr;
}
// fill in the Mesh information
metamesh->ID(meshSO->GetId());
// Add Points
using PointsContainer = typename MeshType::PointsContainer;
const PointsContainer * points = mesh->GetPoints();
typename MeshType::PointsContainer::ConstIterator it_points = points->Begin();
while (it_points != points->End())
{
auto * pnt = new MeshPoint(VDimension);
for (unsigned int i = 0; i < VDimension; ++i)
{
pnt->m_X[i] = (*it_points)->Value()[i];
}
pnt->m_Id = (*it_points)->Index();
metamesh->GetPoints().push_back(pnt);
++it_points;
}
// Add Cells
using CellsContainer = typename MeshType::CellsContainer;
const CellsContainer * cells = mesh->GetCells();
typename MeshType::CellsContainer::ConstIterator it_cells = cells->Begin();
while (it_cells != cells->End())
{
unsigned int celldim = (*it_cells)->Value()->GetNumberOfPoints();
auto * cell = new MeshCell(celldim);
typename MeshType::CellTraits::PointIdConstIterator itptids = (*it_cells)->Value()->GetPointIds();
unsigned int i = 0;
while (itptids != (*it_cells)->Value()->PointIdsEnd())
{
cell->m_PointsId[i++] = *itptids;
++itptids;
}
cell->m_Id = (*it_cells)->Index();
CellGeometryEnum geom = (*it_cells)->Value()->GetType();
switch (geom)
{
case CellGeometryEnum::VERTEX_CELL:
metamesh->GetCells(MET_VERTEX_CELL).push_back(cell);
break;
case CellGeometryEnum::LINE_CELL:
metamesh->GetCells(MET_LINE_CELL).push_back(cell);
break;
case CellGeometryEnum::TRIANGLE_CELL:
metamesh->GetCells(MET_TRIANGLE_CELL).push_back(cell);
break;
case CellGeometryEnum::QUADRILATERAL_CELL:
metamesh->GetCells(MET_QUADRILATERAL_CELL).push_back(cell);
break;
case CellGeometryEnum::POLYGON_CELL:
metamesh->GetCells(MET_POLYGON_CELL).push_back(cell);
break;
case CellGeometryEnum::TETRAHEDRON_CELL:
metamesh->GetCells(MET_TETRAHEDRON_CELL).push_back(cell);
break;
case CellGeometryEnum::HEXAHEDRON_CELL:
metamesh->GetCells(MET_HEXAHEDRON_CELL).push_back(cell);
break;
case CellGeometryEnum::QUADRATIC_EDGE_CELL:
metamesh->GetCells(MET_QUADRATIC_EDGE_CELL).push_back(cell);
break;
case CellGeometryEnum::QUADRATIC_TRIANGLE_CELL:
metamesh->GetCells(MET_QUADRATIC_TRIANGLE_CELL).push_back(cell);
break;
default:
metamesh->GetCells(MET_VERTEX_CELL).push_back(cell);
}
++it_cells;
}
// Add cell links
using CellLinksContainer = typename MeshType::CellLinksContainer;
const CellLinksContainer * links = mesh->GetCellLinks();
if (links)
{
typename MeshType::CellLinksContainer::ConstIterator it_celllinks = links->Begin();
while (it_celllinks != links->End())
{
auto * link = new MeshCellLink();
link->m_Id = (*it_celllinks)->Index();
auto it = (*it_celllinks)->Value().begin();
while (it != (*it_celllinks)->Value().end())
{
link->m_Links.push_back(*it);
++it;
}
metamesh->GetCellLinks().push_back(link);
++it_celllinks;
}
}
// Add point data
metamesh->PointDataType(MET_GetPixelType(typeid(PixelType)));
using PointDataContainer = typename MeshType::PointDataContainer;
const PointDataContainer * pd = mesh->GetPointData();
if (pd)
{
typename MeshType::PointDataContainer::ConstIterator it_pd = pd->Begin();
while (it_pd != pd->End())
{
auto * data = new MeshData<PixelType>();
data->m_Id = (*it_pd)->Index();
data->m_Data = (*it_pd)->Value();
metamesh->GetPointData().push_back(data);
++it_pd;
}
}
// Add cell data
using CellPixelType = typename TMeshTraits::CellPixelType;
metamesh->CellDataType(MET_GetPixelType(typeid(CellPixelType)));
using CellDataContainer = typename MeshType::CellDataContainer;
const CellDataContainer * cd = mesh->GetCellData();
if (cd)
{
typename MeshType::CellDataContainer::ConstIterator it_cd = cd->Begin();
while (it_cd != cd->End())
{
auto * data = new MeshData<CellPixelType>();
data->m_Id = (*it_cd)->Index();
data->m_Data = (*it_cd)->Value();
metamesh->GetCellData().push_back(data);
++it_cd;
}
}
return metamesh;
}
} // end namespace itk
#endif
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