File: itkLevelSetEquationContainer.h

package info (click to toggle)
insighttoolkit5 5.4.3-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 704,384 kB
  • sloc: cpp: 783,592; ansic: 628,724; xml: 44,704; fortran: 34,250; python: 22,874; sh: 4,078; pascal: 2,636; lisp: 2,158; makefile: 464; yacc: 328; asm: 205; perl: 203; lex: 146; tcl: 132; javascript: 98; csh: 81
file content (301 lines) | stat: -rw-r--r-- 8,034 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         https://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

#ifndef itkLevelSetEquationContainer_h
#define itkLevelSetEquationContainer_h

#include "itkObject.h"
#include "itkObjectFactory.h"

namespace itk
{
/**
 *  \class LevelSetEquationContainer
 *  \brief Class for holding a set of level set equations (PDEs).
 *
 *  \tparam TTermContainer Container holding the terms in a level set equation
 *
 *  Evolving level-set functions \f$\left\{ \phi_j \right\}_{j=1}^{M}\f$
 *  can be expressed as follows:
 *  \f{eqnarray*}{
 *  \frac{\partial \phi_1(p)}{\partial \tau} &=& \sum\limits_{i=1}^{N_1} \alpha_{i1}
 *  \cdot \omega_{i1}(p) \\
 *  \frac{\partial \phi_2(p)}{\partial \tau} &=& \sum\limits_{i=1}^{N_2} \alpha_{i2}
 *  \cdot \omega_{i2}(p) \\
 *  & \vdots & \\
 *  \frac{\partial \phi_M(p)}{\partial \tau} &=& \sum\limits_{i=1}^{N_M} \alpha_{iM}
 *  \cdot \omega_{iM}(p)
 *  \f}
 *  where \f$\omega_{iM}\f$ is a term which could depend on any of the level-set
 *  functions \f$\left\{ \phi_j \right\}_{j=1}^{M}\f$ , the input image,
 *  and \f$\alpha_{iM}\f$ is a weight to balance the contribution of each term
 *  in the PDE.
 *
 *  Each equation of this system of equation (PDE) is referred as an equation in
 *  the level-set framework. Each equation \f$ equation_{j} \f$ contributes to the
 *  evolution of the level-set function \f$ \phi_j \f$.
 *
 *  \sa LevelSetEquationTerm
 *
 *  \ingroup ITKLevelSetsv4
 */
template <typename TTermContainer>
class ITK_TEMPLATE_EXPORT LevelSetEquationContainer : public Object
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(LevelSetEquationContainer);

  using Self = LevelSetEquationContainer;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;
  using Superclass = Object;

  /** Method for creation through object factory */
  itkNewMacro(Self);

  /** \see LightObject::GetNameOfClass() */
  itkOverrideGetNameOfClassMacro(LevelSetEquationContainer);

  using TermContainerType = TTermContainer;
  using TermContainerPointer = typename TermContainerType::Pointer;

  using InputImageType = typename TermContainerType::InputImageType;
  using InputImagePointer = typename TermContainerType::InputImagePointer;

  using LevelSetOutputRealType = typename TermContainerType::LevelSetOutputRealType;
  using LevelSetInputIndexType = typename TermContainerType::LevelSetInputIndexType;

  using LevelSetIdentifierType = typename TermContainerType::LevelSetIdentifierType;
  using LevelSetContainerType = typename TermContainerType::LevelSetContainerType;
  using LevelSetContainerPointer = typename TermContainerType::LevelSetContainerPointer;

  /** Add a equation to the system of equations in the EquationContainer map */
  void
  AddEquation(const LevelSetIdentifierType & iId, TermContainerType * iEquation);

  /** Return a pointer to the equation of given id */
  TermContainerType *
  GetEquation(const LevelSetIdentifierType & iId) const;

  /** Update the equation container recursively by calling update on individual equations */
  void
  UpdateInternalEquationTerms();

  /** Supply the update at a given pixel index to update the terms */
  void
  UpdatePixel(const LevelSetInputIndexType & iP,
              const LevelSetOutputRealType & oldValue,
              const LevelSetOutputRealType & newValue);

  /** Initialize parameters in the terms of all the equations */
  void
  InitializeParameters();

  /** Returns the Courant-Friedrichs-Lewy (CFL) contribution
   * for all the equations */
  LevelSetOutputRealType
  ComputeCFLContribution() const;

  /** Set/Get the input speed or feature image */
  itkSetObjectMacro(Input, InputImageType);
  itkGetModifiableObjectMacro(Input, InputImageType);

  itkSetObjectMacro(LevelSetContainer, LevelSetContainerType);
  itkGetModifiableObjectMacro(LevelSetContainer, LevelSetContainerType);

protected:
  using MapContainerType = std::map<LevelSetIdentifierType, TermContainerPointer>;
  using MapContainerIterator = typename MapContainerType::iterator;
  using MapContainerConstIterator = typename MapContainerType::const_iterator;

public:
  class Iterator;
  friend class Iterator;

  class ConstIterator
  {
  public:
    ConstIterator() = default;
    ConstIterator(const MapContainerConstIterator & it)
      : m_Iterator(it)
    {}
    ~ConstIterator() = default;
    ConstIterator(const Iterator & it)
      : m_Iterator(it.m_Iterator)
    {}
    ConstIterator & operator*() { return *this; }
    ConstIterator * operator->() { return this; }
    ConstIterator &
    operator++()
    {
      ++m_Iterator;
      return *this;
    }
    ConstIterator
    operator++(int)
    {
      ConstIterator tmp(*this);
      ++(*this);
      return tmp;
    }
    ConstIterator &
    operator--()
    {
      --m_Iterator;
      return *this;
    }
    ConstIterator
    operator--(int)
    {
      ConstIterator tmp(*this);
      --(*this);
      return tmp;
    }
    bool
    operator==(const Iterator & it) const
    {
      return (m_Iterator == it.m_Iterator);
    }

    ITK_UNEQUAL_OPERATOR_MEMBER_FUNCTION(Iterator);

    bool
    operator==(const ConstIterator & it) const
    {
      return (m_Iterator == it.m_Iterator);
    }

    ITK_UNEQUAL_OPERATOR_MEMBER_FUNCTION(ConstIterator);

    LevelSetIdentifierType
    GetIdentifier() const
    {
      return m_Iterator->first;
    }

    TermContainerType *
    GetEquation() const
    {
      return m_Iterator->second;
    }

  private:
    MapContainerConstIterator m_Iterator;
    friend class Iterator;
  };

  class Iterator
  {
  public:
    Iterator() = default;
    Iterator(const MapContainerIterator & it)
      : m_Iterator(it)
    {}
    Iterator(const ConstIterator & it)
      : m_Iterator(it.m_Iterator)
    {}
    ~Iterator() = default;

    Iterator & operator*() { return *this; }
    Iterator * operator->() { return this; }

    Iterator &
    operator++()
    {
      ++m_Iterator;
      return *this;
    }
    Iterator
    operator++(int)
    {
      Iterator tmp(*this);
      ++(*this);
      return tmp;
    }
    Iterator &
    operator--()
    {
      --m_Iterator;
      return *this;
    }
    Iterator
    operator--(int)
    {
      Iterator tmp(*this);
      --(*this);
      return tmp;
    }

    bool
    operator==(const Iterator & it) const
    {
      return (m_Iterator == it.m_Iterator);
    }

    ITK_UNEQUAL_OPERATOR_MEMBER_FUNCTION(Iterator);

    bool
    operator==(const ConstIterator & it) const
    {
      return (m_Iterator == it.m_Iterator);
    }

    ITK_UNEQUAL_OPERATOR_MEMBER_FUNCTION(ConstIterator);

    LevelSetIdentifierType
    GetIdentifier() const
    {
      return m_Iterator->first;
    }

    TermContainerType *
    GetEquation() const
    {
      return m_Iterator->second;
    }

  private:
    MapContainerIterator m_Iterator;
    friend class ConstIterator;
  };

  Iterator
  Begin();
  Iterator
  End();

  ConstIterator
  Begin() const;
  ConstIterator
  End() const;

protected:
  LevelSetEquationContainer() = default;
  ~LevelSetEquationContainer() override = default;

  LevelSetContainerPointer m_LevelSetContainer{};
  MapContainerType         m_Container{};
  InputImagePointer        m_Input{};
};
} // namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkLevelSetEquationContainer.hxx"
#endif

#endif // itkLevelSetEquationContainer_h