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|
ITK Release 4.8
===============
New Features
------------------------------------------------------------------------
- Wrapping improvements
`- Wrapping now uses CastXML instead of GCCXML`\
`- The latest GCC, Clang, and MSVC are fully supported`\
` - Details: `[`https://kitware.com/blog/home/post/888`](https://kitware.com/blog/home/post/888)\
`- Cross-compilation and packaging support`\
` - Details: `[`https://kitware.com/blog/home/post/904`](https://kitware.com/blog/home/post/904)\
`- ITK_WRAP_VECTOR_COMPONENTS option to specify number of wrapped vector components`\
`- More classes wrapped`
- Compiler Support
`- GCC 5.1`\
`- Clang 3.6.0`\
`- Better cross-compilation support (requires CMake 3.3)`\
`- Experimental support for Emscripten (JavaScript)`\
` - Details: `[`https://kitware.com/blog/home/post/912`](https://kitware.com/blog/home/post/912)\
`- Experimental support for the Raspberry Pi`\
` - Details: `[`https://kitware.com/blog/home/post/887`](https://kitware.com/blog/home/post/887)\
`- Experimental support for Android`\
` - Details: `[`https://kitware.com/blog/home/post/893`](https://kitware.com/blog/home/post/893)\
`- Experimental support for MXE/MinGW-w64`\
` - Details: `[`https://kitware.com/blog/home/post/883`](https://kitware.com/blog/home/post/883)\
`- Experimental support for the POWER8`\
` - Details: `[`https://kitware.com/blog/home/post/891`](https://kitware.com/blog/home/post/891)
- New Remote Modules
`- MinimalPathExtraction`\
` - Insight Journal Article: `[`https://hdl.handle.net/1926/1332`](https://hdl.handle.net/1926/1332)\
`- BridgeNumPy`\
` - Convert itk.Image to NumPy array’s and back`\
`- LabelErodeDilate`\
` - Insight Journal Article: `[`https://hdl.handle.net/10380/3399`](https://hdl.handle.net/10380/3399)\
`- ParabolicMorphology`\
` - Insight Journal Article: `[`https://hdl.handle.net/1926/1370`](https://hdl.handle.net/1926/1370)
- Infrastructure Improvements
`- An UpdateThirdPartyFromUpstream.sh script for 3rd party updates with Git subtree`\
` - Details: `[`https://kitware.com/blog/home/post/899`](https://kitware.com/blog/home/post/899)\
`- Minimum required CMake version is now 2.8.9 `\
`- Many more modules can be built as shared libraries`\
`- ITK_USE_SYSTEM_LIBRARIES variable during initial configuration to turn on use of common system third party libraries by default`\
`- Release testing data tarball split from source tarball`\
`- Gold linker used by default on Linux`
- Filtering Improvements
`- itk::FFTPadImageFilter to automatically pad images for the FFT implementation’s supported greatest prime factor`\
`- itk::AtomicInt class for parallel computation`\
`- Various performance enhancements`
- Registration Improvements
`- Point set SyN registration`\
`- Point set BSpline SyN registration`
- Documentation Improvements
`- The ITK Software Guide is now available in HTML`\
` - Details: `[`https://kitware.com/blog/home/post/890`](https://kitware.com/blog/home/post/890)\
`- Updates to the Software Guide, Doxygen, Wiki and Sphinx Examples`
- Third Party Library Updates
`- GDCM updated to latest upstream`\
`- KWSys updated to the latest upstream`\
`- MetaIO updated to the latest upstream`\
`- MINC updated to the latest upstream`
- Style improvements -- ITK gets more stylish with every release!
<!-- -->
- Improved code coverage -- we are at 85.4%!
<!-- -->
- - Lots\* of important bug fixes
Changes from v4.8rc03..v4.8.0
------------------------------------------------------------------------
Davis Vigneault (1):
` COMP: C++11 Warnings in thirdparty PNG module.`
Matthew McCormick (9):
` COMP: Fix unused parameter warnings in itkMultiThreaderNoThreads.`\
` BUG: Do not output CMake log files in itkSystemInformationTest.`\
` COMP: Work around segfaults with VS12 in RegionOfInterestImageFilter.`\
` DOC: Update Wiki Examples Remote to June 26, 2015.`\
` COMP: Update ParabolicMorphology to address doxygen warning.`\
` COMP: Add missing exports in the ITKFEM module.`\
` BUG: Use CMAKE_LIBRARY_OUTPUT_DIRECTORY for build tree WrapITK.pth.`\
` DOC: Document grafting the input image in composite filters.`\
` DOC: Bump SphinxExample remote module version to 2015-07-02.`
Changes from v4.8rc02..v4.8rc03
------------------------------------------------------------------------
Bradley Lowekamp (3):
` BUG: Remove reliance on exceptions in StringTools::ToData methods`\
` BUG: Fix WriteCellsAsBinary and valgrind defects`\
` COMP: Explicitly export SingleValuedNonLinearVnlOptimizerv4`
Matthew McCormick (4):
` COMP: Address may be used uninitialized in IdentityTransformTest.`\
` COMP: Address array subscript above bounds in VTKPolyDataReader.`\
` COMP: Work around GDCM test segfault with Clang 3.5+.`\
` BUG: Do not use pthreads with Emscripten.`
Michka Popoff (1):
` ENH: Update PyInit for Python 3`
Changes from v4.8rc01..v4.8rc02
------------------------------------------------------------------------
Arnaud Gelas (2):
` BUG: memory leaks when calling itk::Mesh::Graft`\
` BUG: fix memory leaks in BorderQuadEdgeMeshFilter using itk::AutoPointer`
Bradley Lowekamp (1):
` Revert selection `“`ENH:`` ``Add`` ``shared`` ``libraries`` ``for`` ``ITK`` ``libraries`”
Davis Vigneault (1):
` STYLE: Minor typographical changes in ParameterizationQuadEdgeMeshFilter`
Dženan Zukić (1):
` DOC: Improve docs for ConnectedComponentImageFilter`
Hans Johnson (1):
` STYLE: Use consistent names in template parameters`
Sean McBride (2):
` COMP: Update MINC to upstream 85145dca36`\
` BUG: updated MINC to a77da29`
Changes from v4.7.0..v4.8rc01
------------------------------------------------------------------------
Alexander Hewer (1):
` COMP: fixed error `“`Dunno`` ``about`` ``this`` ``gcc`”` for gcc 5.1`
Arnaud Gelas (14):
` ENH: add MinimalPathExtraction as a remote module`\
` ENH: fix KWStyle errors for SubdivisionQuadEdgeMesh`\
` COMP: fix warning with non default template parameter for OutputImage`\
` COMP: missing ';' in itkSetClampMacro`\
` STYLE: no need to expose internal type`\
` COMP: fix warning with non default template parameter for OutputImage`\
` COMP: fix warning with non default template parameter for OutputImage`\
` BUG: fix BinaryImageToLabelMapFilter with negative OutputBackgroundValue`\
` DOC: add explanations about input and out filters`\
` COMP: missing include in IterativeTriangleCellSubdivision`\
` DOC: Improve documentation for ParameterizationQuadEdgeMeshFilter`\
` BUG: not all combinations were actually test`\
` ENH: add an exception in BorderQuadEdgeMeshFilter if no boundaries`\
` COMP: fix CMake warning in ITKModuleHeaderTest`
Bill Lorensen (7):
` ENH: Update to KWStyle conformant version`\
` ENH: Add interpolate capability`\
` ENH: WikiExamples QuickView Update`\
` COMP: VTK AUTOINIT redefinition warnings`\
` COMP: Only require the minimal VTK modules`\
` COMP: Compiler hidden visibility on Mac compiler`\
` COMP: EventMacro backward compatibility`
Brad King (25):
` COMP: Fix variable reference in ITKVtkGlue module files`\
` ENH: ExternalData: Allow local stores without any URL templates`\
` ENH: ExternalData: Warn on missing file instead of failing`\
` ENH: ExternalData: Add support for custom download scripts`\
` ENH: ExternalData: Add support for custom algorithm-to-URL mapping`\
` DOC: ExternalData: Update documentation to match CMake copy`\
` ENH: Teach UpdateThirdPartyFromUpstream to support spaces in path`\
` ENH: Improve UpdateThirdPartyFromUpstream for initial imports`\
` ENH: Require CMake 2.8.9 or greater`\
` ENH: Do not produce ITKGDCM library when using system GDCM`\
` ENH: Drop gdcm source subtree to prepare for fresh import`\
` ENH: Add script to update GDCM from upstream`\
` STYLE: Tell Git not to check whitespace in GDCM`\
` STYLE: Tell Git about larger files in GDCM`\
` COMP: Configure GDCM to build inside ITK`\
` COMP: Fix GDCM to handle older expat library`\
` COMP: Cleanup CMP0022 warnings in GDCM module`\
` COMP: Add missing include in GDCM source`\
` COMP: Teach GDCM to honor ITK_DYNAMIC_LOADING option`\
` ENH: KWSys: Tell Git not to export .gitattributes`\
` COMP: Remove cmake_minimum_required calls from GDCM`\
` COMP: Remove extra CMake policy settings in GDCM`\
` COMP: Use more standard SSE intrinsics in GDCM copy of OpenJPEG`\
` COMP: Fix GDCM std::accumulate initial value type`\
` ENH: Update version of CastXML built for wrapper generation`
Bradley Lowekamp (48):
` PERF: Use ImageAlgorithm::Copy in ImageSeriesWriter`\
` BUG: Enable setting all zeroes for fixed parameters for displacement`\
` ENH: Refactor versor to matrix transform code`\
` DOC: Clarify that Scale Skew Versor does addition`\
` COMP: Fix unsafe usage of sprintf`\
` BUG: Correct Simularity3D Jacobian`\
` BUG: Ensure OptimizerParameters doesn't leak its helper`\
` BUG: Fix incorrectly ordering of template parameters`\
` COMP: check for search.h in libtiff`\
` BUG: restore the center point fixed parameters for scale transforms`\
` PERF: Remove frequent dynamic allocations used with std::vector`\
` COMP: Use _timezone for Visual Studio`\
` BUG: Restore IO support for BSplineDeformableTransform`\
` BUG: Enable VectorImage to work with the ImageSeriesWriter`\
` BUG: Replace std::cout message Warning marco`\
` BUG: Correct ExtractImageFilters Type macro`\
` DOC: Separately document IsNull and IsNotNull`\
` ENH: Modularize KWStyleTests`\
` BUG: Remove ExhaustiveOptimizer ivar which was unused`\
` STYLE: Update IOFDF to address KWStyle issues`\
` BUG: Fix undefined signed integer shift`\
` BUG: Fix IOFDFInDoxygenGroup test`\
` BUG: Update MGHImageIO for header guarder style`\
` BUG: Fix itkFDFImageIOTest link error on windows`\
` STYLE: Update SCIFIO for KWStyke failures`\
` BUG: Move LBFGSB callback helper to parent`\
` BUG: Use base's NumberOfIterations for stopping condition`\
` BUG: Update AmoebaOptimizer NumberOfIterations`\
` BUG: Use base's NumberOfIterations for stopping condition`\
` PERF: Report progress for linear transform only at scanline completion`\
` BUG: Correct convergence string check`\
` BUG: Avoid underflow in gradient range calculation`\
` ENH: Use return by value for ImageAlgorithm::EnlargeRegionOverBox`\
` BUG: No exception for 0 parameter transforms`\
` COMP: Address conversion compilation warning`\
` ENH: Use PrinSelfObjectMacro`\
` BUG: Use module's libraries for linking header test.`\
` ENH: Add export specifications to FFT library`\
` COMP: Address conversion compilation warning`\
` COMP: This patch address linking errors with WrapITK`\
` DOC: Improving documentation for the names inputs of the ProcessObject`\
` BUG: Isolate CannyEdgeDetection's internal filter from external`\
` PERF: Refactor ExpandImageFilter loop`\
` ENH: Add AtmoicInt class, use TimeStamp & LightObject`\
` COMP: Address signed to unsigned comparison warning in AtomicInt Test`\
` ENH: Move IsPrime and GreatestPrimeFactor to compiled cxx file`\
` COMP: Add export missing export specifications`\
` BUG: Fix reading HDF5 images into different dimension.`
Brian Helba (2):
` ENH: Add scripts for automated updating of ThirdParty libraries`\
` ENH: Make Vector construction from scalar value explicit`
Christopher Mullins (12):
` STYLE: Keep codesnippet lines under 80 characters.`\
` STYLE: Fix Latex blocks in documentation to include newlines.`\
` COMP: Fix clang warnings`\
` DOC: Fix Latex underscore for SoftwareGuide`\
` BUG: Return a correct voronoi partition in Danielsson filter example.`\
` STYLE: Fix Latex blocks in documentation to include newlines.`\
` DOC: Use the dilated version of the FivePoints image`\
` COMP: Use c++11 noexcept declarator.`\
` COMP: Fix override warnings on clang with GPU module and MINC`\
` COMP: Fix clang override warnings for Review module.`\
` COMP: Fix more clang warnings in review module`\
` COMP: Fix more clang override warnings in Review module.`
Cyril Mory (3):
` BUG: Fixed itkWarpImageFilter wrong result in some cases`\
` ENH: Method to compute InputRequestedRegion in itkWarpImageFilter`\
` ENH: Moved some of itkWarpFilter from private to protected`
David Froger (2):
` ENH: Check regions in HDF5 streaming test`\
` BUG: Fix HDF5 write streaming test.`
Davis Vigneault (4):
` STYLE: Minor style and documentation changes to ITK examples.`\
` DOC: Minor changes and clarifications to the registration chapter of Book 2.`\
` STYLE: Minor wording and formatting changes to Software Guide Mesh examples.`\
` COMP: Build failure using EuclideanDistancePointMetric with mismatched meshes.`
Dženan Zukić (4):
` COMP: VS 2012+ compile fixes and CMake warnings`\
` COMP: fixing quote matching in vtkGlue-related .cmake file`\
` ENH: adding reverse iteration test`\
` ENH: using scanline iterator instead of linear iterator`
GDCM Upstream (1):
` GDCM 2015-04-29 (81e551fc)`
Gary JIA (1):
` BUG: Fix memory leak at GPUCommon`
Gaëtan Lehmann (21):
` BUG: fix extra carriage return in python callbacks`\
` ENH: use castxml in wrapping`\
` COMP: almost fix java build`\
` ENH: use modern cmake list operations in wrapping`\
` COMP: hide compiler warnings when building pcre and swig`\
` COMP: fix the IOFDF module name used in wrapping`\
` COMP: fix last python runtime warnings about unknown types`\
` COMP: fix undefined __float128 type with gcc`\
` BUG: reactivate PythonGetNameOfClass and fix the FDFImageIOFactory name`\
` COMP: fix warnings due to double MultipleValuedCostFunction wrapper`\
` BUG: fix ipython custom completion`\
` BUG: fix runtime information for cross correlation filters`\
` ENH: let the user choose the tradeoff between size and speed in fft operations`\
` ENH: update progress in ImageFileReader`\
` ENH: initialize the progress in ImageFileWriter`\
` BUG: fix extra line return in terminal progress display`\
` BUG: fix missing space before `“`done`”` in progress display`\
` ENH: pass ActualXDimensionIsOdd through the pipeline`\
` COMP: fixes for SizeGreatestPrimeFactor`\
` ENH: Add itkFFTPadImageFilter`\
` ENH: factorize shared code in itk::PadImageFilterBase`
Gert Wollny (1):
` COMP: defining ITK_USE_FLOAT_SPACE_PRECISION`
Hans Johnson (39):
` COMP: Add c++11 override designation`\
` COMP: Identify null pointer assignments`\
` STYLE: rm explicit void for parameterless function`\
` STYLE: Use ITK_NULLPTR to utilize c++11 features`\
` BUG: Incorrect addition of ITK_OVERRIDE`\
` COMP: Use STREQUAL instead of MATCH`\
` BUG: return type defaults to zero.`\
` BUG: ImageType, CofficientImageArray types missing`\
` DOC: Invalid doxygen return for void function.`\
` COMP: _Pragma suppress fltpnt equality warnings`\
` COMP: Allow exact floatpnt equality checks.`\
` COMP: Avoid floatpnt equality check`\
` COMP: Floatpnt equality for divisor`\
` COMP: Avoid unnecessary float pnt equality checks.`\
` PERF: Improve perf of ANTSNeighborhoodCorrelation`\
` BUG: Test depending on itkMesh.h in Common`\
` COMP: Make DCMTK header functions const`\
` Revert `“`COMP:`` ``VTK`` ``AUTOINIT`` ``redefinition`` ``warnings`”\
` COMP: VTK and ITK H5 build program collision`\
` COMP: Create out-of-line virtual method defintions`\
` COMP: Create out-of-line virtual method macros`\
` DOC: Clarify strange syntax for itk::MetaEvent`\
` COMP: Fix ENABLE_SHARED variable name`\
` STYLE: Remove outdated cmake version support`\
` STYLE: Move SymmetricEigenAnalysis to Deprecated`\
` COMP: Prefer modern CMake visibility settings`\
` STYLE: Use ITK_NOEXCEPTION macro`\
` ENH: Continue to deprecate ::Zero and ::One`\
` ENH: Avoid need for const_cast, ensure consistency`\
` BUG: Incorrect function signature`\
` COMP: Intel compiler warning suppression`\
` ENH: Add shared libraries for ITK libraries`\
` ENH: Remove unnecessary const_cast`\
` STYLE: Move utility TransformIOHelper to cxx file`\
` BUG: Missing ITKIOMINC_EXPORT on __Private()`\
` STYLE: Fixed AnalyzeObjectMap header guard style.`\
` COMP: Missing exports for templates`\
` ENH: Update MGHIO for consistency with ITK.`\
` BUG: Remove shared specifications from TransformIO`
Ivan Setiawan (2):
` BUG: Fix initial ImageTrueMax to the most negative value.`\
` BUG: Test case to verify fix of ImageTrueMax in MattesMI.`
Jan Bergmeier (1):
` DOC: Changed indices for steps in ExhaustiveOptimizer.`
Jon Haitz Legarreta (10):
` ENH: New test for the BinaryStatisticsKeepNObjectsImageFilter`\
` ENH: New test for the itkLabelShapeKeepNObjectsImageFilter`\
` ENH: Add test for itkShapeRelabelImageFilter`\
` ENH: Add test for the itkLabelStatisticsKeepNObjectsImageFilter`\
` ENH: Add test for itkBinaryShapeKeepNObjectsImageFilter`\
` ENH: Add test for itkLabelStatisticsOpeningImageFilter`\
` DOC: Correct documentation typo.`\
` ENH: Increase code coverage for itkCustomColormapFunction`\
` ENH: Increase code coverage for itkCustomColormapFunction`\
` ENH: New test for the itkMetaGaussianConverter`
Julien Jomier (1):
` BUG: Output pointer origin is not set causing a memory access error.`
KWSys Robot (3):
` KWSys 2015-04-19 (4f39791b)`\
` KWSys 2015-05-12 (b1d560a0)`\
` KWSys 2015-05-18 (9a6b7c3f)`
Kevin H. Hobbs (1):
` COMP: new baseline for building against VTK master`
Marius Staring (2):
` BUG: workaround for 64bit VS2013 Release segfaults`\
` COMP: workaround for 64bit VS2013 Release ICE`
Matthew McCormick (160):
` ENH: Add BridgeNumPy Remote Module.`\
` COMP: Bump AnalyzeObjectMapIO to fix doxygen warning.`\
` STYLE: Style changes for itkGaussianDerivativeImageFunctionTest.`\
` ENH: Test GaussianDerivativeImageFunction with unsigned short.`\
` ENH: Bump CMakeLists.txt version to 4.8.0.`\
` DOC: Add C++11 macros to doxygen configuration.`\
` ENH: Remove FindNUMARRAY.cmake.`\
` STYLE: Too many spaces before semi-colon in PCAShapeSignedDistanceFunction.`\
` COMP: Bump Wiki Examples revision to fix Doxygen warnings.`\
` COMP: Fix ITK_OVERRIDE update DebugMacro build errors.`\
` DOC: Updates to GettingStarted.txt.`\
` BUG: Remove Testing/Temporary/CTestCostData.txt.`\
` ENH: Update doxygen.config for Doxygen 1.8.9.1.`\
` ENH: Bump release branch version to 4.7.1.`\
` ENH: Bump CMakeLists.txt version to 4.8.0.`\
` BUG: Clear TransformIO's list of transforms in TransformFileReader.`\
` DOC: Rename duplicate doxygen section.`\
` Revert Doxygen version 1.8.9.1 to 1.8.5 config to clean up dashboard`\
` DOC: Fix Doxygen override, nullptr, noexcept definitions.`\
` DOC: Note that push access is not required to get patches merged.`\
` COMP: Fix wrapping runtime warning on unknown itk::Matrix.`\
` COMP: Add missing types for MeshTraits wrapping.`\
` COMP: Do not wrap the Container types for CellInterface * types.`\
` COMP: Add wrapping for CellTraitsInfo.`\
` COMP: Wrap missing Mesh templates.`\
` DOC: Clean up some wrapping comments.`\
` ENH: Add wrapping for ITKImageNoise module.`\
` STYLE: Clean up inter-definition space for Image,ImageBase,ProcessObject.`\
` ENH: Fetch source tarball external data from midas3.kitware.com.`\
` BUG: Fix BridgeNumPy signed / unsigned short correspondance.`\
` DOC: Improve ImageScanlineIterator documentation.`\
` ENH: Add missing {Set,Get}Element methods to Array2D.`\
` BUG: Fix linking SmoothingRecursiveYvvGaussianFilter with install tree.`\
` BUG: Add CMake export code for ITK_USE_SYSTEM_GDCM.`\
` ENH: Pass CMAKE_GENERATOR to ExternalProject's.`\
` ENH: Update LLVM/Clang ExternalProject to 3.6.0.`\
` ENH: Update MetaIO License from Upstream.`\
` ENH: Bump MetaIO to latest upstream.`\
` BUG: Export ITK_FFTW_INCLUDE_PATH as CMake path.`\
` COMP: Do not include tests/ directory in clang tarball.`\
` ENH: Add Azure Storage as ExternalData source.`\
` STYLE: Update SplitComponents module for KWStyle fixes.`\
` COMP: Fix LevelSetsv4 tests with libc++.`\
` STYLE: Style fixes for LevelSetsv4 and related classes.`\
` BUG: Move MagnitudeAndPhaseToComplex filter wrapping to ITKImageIntensity.`\
` ENH: Document testModules.sh and move to Utilities/Maintenance`\
` BUG: Fix Python tests on Windows with Ninja generator.`\
` STYLE: Update IOSTL module for KWStyle test.`\
` BUG: Set ITK_BUILD_SHARED in ITKConfig.cmake on Windows.`\
` BUG: Suppress wrapping type conversions warnings with MSVC.`\
` COMP: Address quoted MSVC variable in GDCM.`\
` BUG: WrapITK.pth should contain the lib/ directory with VS.`\
` COMP: Suppress swig build configure warning.`\
` ENH: Use CMAKE_CROSSCOMPILING_EMULATOR to run HDF5 detection.`\
` BUG: Do not use EXECUTABLE_OUTPUT_PATH for vcl tests.`\
` BUG: Do not enable floating point exceptions in tests with MinGW.`\
` DOC: Update KWStyle location.`\
` BUG: Add QuickViewTest baseline for Mac.`\
` ENH: MetaIO use UpdateThirdPartyFromUpstream.sh`\
` ENH: Arrange MetaIO sources for UpdateThirdPartyFromUpstream.sh.`\
` ENH: Add root snapshot commit support to UpdateThirdPartyFromUpstream.sh`\
` COMP: Do not try to generate tiff_fax3sm.c when cross compiling.`\
` COMP: Android does not currently have posix_memalign.`\
` COMP: The Android pwd.h passwd struct does not have a pw_gecos entry.`\
` COMP: Android does not have pthread_setcancelstate.`\
` COMP: Do not do __errno_location workaround on Android.`\
` COMP: Removed unused parameters in itkThreadPoolTest.`\
` BUG: Address detection of TransformReadWriteTest as executable.`\
` ENH: Set CMP0056 to NEW.`\
` COMP: Work around test file too big with x64_64-w64-mingw32.`\
` COMP: Increase itkMattesMutualInformationImageToIMageMetricv4Test tolerance.`\
` COMP: Address NumericTraits warning related to POWER8 char.`\
` BUG: Add new ResampleImageFilter9Test baseline for MinGW.`\
` BUG: Add MinGW baseline for VoronoiPartitioningImageFilterTest1.`\
` COMP: Fix vnl_sample.cxx for srand48 but no drand48.`\
` ENH: Add ITK_DYNAMIC_LOADING CMake option.`\
` COMP: Support S_IRUSR and S_IWUSR.`\
` COMP: Do not log swig configure output.`\
` BUG: NumericTraits< char > does not have Self typedef.`\
` ENH: Do not use TestBigEndian from CMAKE_ROOT.`\
` COMP: Use sizeof(void *) instead of sizeof(size_t) for address model.`\
` COMP: Do not use GCC demangling with emscripten.`\
` ENH: Use try_run to determine if double correction required.`\
` COMP: Address quoted MSVC variable in GDCM.`\
` COMP: Suppress Swig configure output.`\
` COMP: Remove duplicate InternalLabelType typedef.`\
` COMP: Set CMP0058 to NEW.`\
` COMP: Add missing InternalLabelType.`\
` BUG: Specify absolute path to double-conversion-configure.h for install.`\
` DOC: Clarify the UpdateThirdPartyFromUpstream.sh commit message.`\
` BUG: Link to VTK 6 rendering backend modules.`\
` COMP: Pass --quiet to swig's configure script.`\
` STYLE: Update HigherOrderAccurateGradient module for style fixes.`\
` ENH: Mark ITK_DYNAMIC_LOADING as an advanced CMake variable.`\
` COMP: Ignore swig-prefix warnings.`\
` BUG: GDCM set default ultrasound spacing when not found.`\
` COMP: Initialize arrays in itkCurvatureFlowFunction.`\
` BUG: Add VTK modules for annotation rendering.`\
` BUG: Link vtkRenderingFreeType in the VTK modules.`\
` COMP: Add itkIntTypes.h header for SizeValueType in itkVnlFFTCommon.h`\
` STYLE: Style fixes for RayCastHelper::CalcRayIntercepts`\
` COMP: Run the SWIG configure step in a CMake script.`\
` ENH: Bump release branch version to 4.7.2.`\
` STYLE: Bump IOFDF module for style and cleanup.`\
` BUG: Fix DoxygenInGroup test from .zip release files.`\
` COMP: Do not wrap exotic QuadEdgeMesh CellInterface types.`\
` COMP: Remove FFTWGlobalConfiguration param doxygen keyword.`\
` COMP: Do not reference ::MetaEvent in itkMetaEvent.h docs.`\
` DOC: itkSymmetricEigenSystem is now in the ITKDeprecated module.`\
` BUG: Fix TestDriver executable for itkSymmetricEigenSystemTest.`\
` BUG: Use consistent SizeGreatestPrimeFactor in deconvolution tests.`\
` COMP: Use signed char in ImageToImageMetricv4 test.`\
` COMP: Do not include itkDynamicLoader in header tests.`\
` COMP: Include byteswap.h for Android in GDCM.`\
` COMP: Use signal.h instead of sys/signal.h in GDCM.`\
` COMP: Not all versions of Android have posix_memalign.`\
` COMP: Initialize variable in PointSetToListSampleAdaptorTest.`\
` COMP: Suppress getpwnam warning with static executables.`\
` COMP: Tighten LandmarkWarping2 lines for Software Guide.`\
` ENH: Allow skip of FloatPointExceptions implementation for absent fenv.h.`\
` COMP: Define feenableexcept for Emscripten.`\
` BUG: HDF5 do not force CMake CheckTypeSize on include.`\
` STYLE: Style fixes to itkVideoStream.e`\
` COMP: Ignore build warnings for libs unfound by emscripten.`\
` BUG: Run HDF5 H5detect in working directory with the executable.`\
` BUG: HDF5 use CMAKE_EXECUTABLE_SUFFIX.`\
` COMP: Work around Emscripten internal compiler crash in VideoStream.`\
` COMP: Use byteswap.h with GDCM with Emscripten.`\
` COMP: Recognize Emscripten in socket++.`\
` BUG: Remove HDF5's own internal CheckTypeSize.cmake.`\
` ENH: Enable cross-compiling of the wrapping.`\
` COMP: Missing semi-colon in FFT Hermitian filters.`\
` ENH: Add ExternalData_NO_SYMLINKS option.`\
` ENH: Mount local filesystem in the test driver for Emscripten.`\
` BUG: Do not install wrapping with CMAKE_PREFIX_PATH.`\
` ENH: Define CPACK_PACKAGE_CONTACT.`\
` ENH: Add post-commit hook for third party library patches.`\
` ENH: Pass the CastXML flags directly.`\
` STYLE: Rename GCC-XML references to CastXML.`\
` ENH: Send an error when CMAKE_CXX_COMPILER_TARGET is not set.`\
` ENH: Bump CastXML version for cross-compiling target fix.`\
` BUG: Use STRING type for PY_SITE_PACKAGES_PATH.`\
` BUG: Continue when IPython.get_ipython throws an AttributeError.`\
` ENH: Add ITK_USE_SYSTEM_LIBRARIES`\
` STYLE: Fix indentation in ITKSetStandardCompilerFlags.cmake.`\
` COMP: Do not enable ITK_HAVE_SYNC_BUILTINS with Emscripten.`\
` COMP: Fix MinGW ITK_HAVE_SYNC_BUILTINS detection.`\
` ENH: Split testing data tarball form source tarball.`\
` COMP: Do not use ITK_NULLPTR as sentinel.`\
` ENH: Use gold linker on Linux with GCC.`\
` COMP: Add try_compile check for gold linker.`\
` COMP: Do not build dsrc2c.c with -fvisibility-inlines-hidden.`\
` BUG: Remove shared specifications from IOTransformBase.`\
` BUG: Required GCC version for gold linker is 4.8.3.`\
` BUG: Fix ITKIOMINCExport.h capitalization.`\
` BUG: Add missing include directory required after MINC update.`\
` BUG: Bring in IOFDF license updates.`\
` COMP: Add missing HDF5 include for MINC.`\
` COMP: Add missing HDF5 include directory for ITKIOMINC.`\
` COMP: Fix itkVTKImageExport.h header name in VtkGlue.i.`
MetaIO Maintainers (2):
` MetaIO 2015-04-12 (b7969294)`\
` MetaIO 2015-04-21 (dc4f7d16)`
Michka Popoff (20):
` COMP: Use c++ style comments in pyBase.i`\
` ENH: Update to swig 3.0.3`\
` STYLE: Cleanup up cmake files (if, endif, foreach, endforeach).`\
` ENH: Update to SWIG 3.0.5`\
` COMP: Fix PythonReadDicomTagTest on OS X`\
` ENH: Improve wrapping for Vector image types`\
` ENH: Cleanup itkComposeImageFilter wrapping`\
` ENH: Setup correct wrapping of GradientRecursiveGaussianImageFilter`\
` ENH: Add Get/SetSigmaArray to GradientRecursiveGaussianImageFilter`\
` ENH: Add checks for base types when wrapping more complex types`\
` COMP: Fix DiffeomorphicDemonsRegistration Wrapping`\
` STYLE: Rename ITK_WRAP_DIMS to ITK_WRAP_IMAGE_DIMS`\
` ENH: Add ITK_WRAP_VECTOR_COMPONENTS option`\
` STYLE: Replace GCCXML by CASTXML`\
` BUG: Wrap FixedArray sizes also for vector components`\
` ENH: Wrap MersenneTwisterRandomVariateGenerator`\
` ENH: Wrap CustomColormapFunction`\
` ENH: Update to PCRE 8.37`\
` ENH: Enable wrapping of 4 dimensional vectors`\
` ENH: Remove inline namespace fix for Wrapping`
Nick Tustison (10):
` ENH: Adding point set reg. capabilities for SyN.`\
` PERF: Tolerance for testing needs to be increased.`\
` BUG: Coverity divide by zero complaint.`\
` BUG: Metric evaluation had an incorrect sign.`\
` ENH: Making the point set type visible.`\
` BUG: Need to check if maxNorm == 0.`\
` BUG: Pixel type shouldn't be initialized with scalar.`\
` ENH: Cleaning up point set reg. in BSplineSyN`\
` ENH: Adding tangent space calculation for SyN methods.`\
` BUG: Added sampling only within the specified mask.`
Niels Dekker (2):
` BUG: workaround for 64bit VS2013 Release segfault`\
` COMP: Fixed MSVC warnings, `“`warning`` ``D9025:`` ``overriding`` ``'/W1'`` ``with`` ``'/w'`”
Richard Beare (3):
` ENH: LabelErodeDilate as a remote module`\
` ENH: remote.cmake for parabolic morphology`\
` ENH: Use SHA for LabelErodeDilate module.`
Rolf Eike Beer (2):
` STYLE: ExternalData: Replace MATCHES with STREQUAL where possible`\
` STYLE: ExternalData: Clean up duplicate regex matches with CMAKE_MATCH_`<n>
Sean McBride (12):
` COMP: Changed KWStyle check for header include guard names`\
` COMP: Remove double underscore in header guards (.h & __itk*_h form)`\
` COMP: Remove double underscore in header guards (.hxx & __itk*_h form)`\
` COMP: Remove double underscore in header guards (.in & __itk*_h form)`\
` COMP: Remove remaining double underscore in header guards (__itk form)`\
` COMP: Remove unnecessary header guards in .cxx files`\
` COMP: Manually search for `“`__itk`”` and clean up double underscore usage`\
` COMP: fixed clang -Wkeyword-macro warning by removing invalid #undef`\
` COMP: Suppress clang -Wdocumentation-unknown-command false positive`\
` COMP: properly escape @ char in doxygen comments`\
` COMP: Escaped @ character in doxygen comments`\
` BUG: updated libminc SHA to newest`
Ziv Yaniv (1):
` BUG: Versor initialized with null axis (0,0,0) did not throw exception.`
ITK Sphinx Examples Changelog
------------------------------------------------------------------------
Arnaud Gelas (9):
` DOC: recommend to use CreateNewExample.py`\
` ENH: Add one example for BinaryFillholeImageFilter`\
` add one example to illustrate the usage of LabelSelectionLabelMapFilter`\
` Apply BinaryMorphologicalClosingFilter on all LabelObjects of given LabelMap`\
` Add one example to apply morphological closing on specific LabelObject`\
` fix rst formatting`\
` Add one example to overlay one label map on top of one image`\
` Minor fixes in page title`\
` COMP: Fix sphinx warning (missing '.' for one title)`
Bradley Lowekamp (1):
` BUG: Fix ITK_WRAP_PYTHON check`
Dženan Zukić (1):
` Adding DicomSeriesReadImageWrite3`
Matt McCormick (11):
` ENH: Add option to build Python wrapping in the superbuild.`\
` COMP: Remove `“`ImageFilter`”` from ApplyGradientRecursiveGaussian.`\
` COMP: Set CMP0054 to NEW.`\
` BUG: Fix links to Midas community.`\
` ENH: Send an error when the source/build path is too long on Windows.`\
` BUG: Extend the superbuild path limit.`\
` BUG: Add ITKMetaIO to ComputePeronaMalikAnisotropicDiffusion to create output.`\
` ENH: Update VTK version to 6.2.0.`\
` COMP: Do not log ExternalProject steps that generate false positives.`\
` COMP: Remove unused variables and types.`\
` ENH: Bump ITK ExternalProject to v4.8.0.`
Michka Popoff (19):
` ENH: Add GradientRecursiveGaussianImageFilter example`\
` COMP: Fix failing ApplyGradientRecursiveGaussianImageFilter tests`\
` DOC: Fix GradientRecursiveGaussianImageFilter documentation`\
` COMP: Fix missing images in ApplyGradientRecursiveGaussianFilter`\
` ENH: Add new example with GradientRecursiveGaussianImageFilter`\
` BUG: Correctly detect and set python_file`\
` ENH: Add Python code to RemoveHolesNotConnectedToImageBoundaries`\
` STYLE: Remove example_name and folder variables`\
` STYLE: Pep8 cleanup for CreateNewExample.py.in`\
` ENH: Improve CreateNewExample script`\
` ENH: ADD ComputePeronaMalikAnisotropicDiffusion Python Example`\
` ENH: Add Anti Alias Python Example`\
` ENH: Add tests for Python examples in AnisotropicSmoothing`\
` BUG: Fix PeronaMalik python example`\
` ENH: Add ApplyColorMap Python example`\
` ENH: Simplify CMakeLists Python setup`\
` ENH: Add custom colormap Python example`\
` ENH: Improve Python SuperBuild`\
` ENH: Replace double with float in python examples`
ITK Software Guide Changelog
------------------------------------------------------------------------
- Note that improvements in the Examples/ directory of the ITK
repository also contribute to the improvements in the Software
Guide.
Davis Vigneault (1):
` DOC: Fix typo's in SystemOverview and DataRepresentation.`
Matt McCormick (9):
` ENH: Update the MetaIO license file location.`\
` ENH: Add option to build HTML output with tex4ht.`\
` ENH: Remove the 000- and 001- prefixes to the main .tex files.`\
` ENH: Add CMake option to turn off the draft watermark.`\
` ENH: Add some styling to the HTML index.`\
` DOC: Update Python wrapping information.`\
` BUG: Fixes to How To Write A Filter.`\
` ENH: Bump ITK ExternalProject to July 01, 2015.`\
` COMP: Address missing bracket and backslash escapes.`
ITK Apps Changelog
------------------------------------------------------------------------
Matt McCormick (2):
` COMP: Fix @only capitalization in External-FLTK.cmake.`\
` ENH: Bump ITK Superbuild version to 4.8.0.`
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