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Source: ipig
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Build-Depends: debhelper (>= 9),
javahelper (>=0.25),
default-jdk,
ant,
libcommons-compress-java,
libcommons-net-java,
libjdom1-java,
libxerces2-java
Standards-Version: 3.9.5
Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/ipig.git
Vcs-Git: git://anonscm.debian.org/debian-med/ipig.git
Homepage: http://sourceforge.net/projects/ipig/
Package: ipig
Architecture: any
Depends: ${misc:Depends},
${java:Depends},
Description: integrating PSMs into genome browser visualisations
iPiG targets the integration of peptide spectrum matches (PSMs) from
mass spectrometry (MS) peptide identifications into genomic
visualisations provided by genome browser such as the UCSC genome
browser (http://genome.ucsc.edu/).
.
iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in
text format and provides results in genome track formats (BED and GFF3
files), which can be easily imported into genome browsers.
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