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|
name: Test
on:
pull_request:
push:
branches-ignore:
- "pre-commit-ci*"
concurrency:
group: >-
${{ github.workflow }}-
${{ github.ref_type }}-
${{ github.event.pull_request.number || github.sha }}
cancel-in-progress: true
env:
# UTF-8 content may be interpreted as ascii and causes errors without this.
LANG: C.UTF-8
IPP_DISABLE_JS: "1"
JUPYTER_PLATFORM_DIRS: "1"
jobs:
test:
runs-on: ${{ matrix.runs_on || 'ubuntu-22.04' }}
timeout-minutes: 20
strategy:
# Keep running even if one variation of the job fail
fail-fast: false
matrix:
include:
- python: "3.9"
- python: "3.8"
cluster_type: mpi
- python: "3.10"
cluster_type: slurm
container: slurmctld
- python: "3.8"
- python: "3.10"
env:
IPP_CONTROLLER_IP: "*"
- python: "3.9"
env:
IPP_ENABLE_CURVE: "1"
- python: "3.9"
runs_on: windows-2022
- python: "3.9"
runs_on: macos-14
- python: "3.11"
- python: "3.12"
pre: pre
steps:
- uses: actions/checkout@v4
- name: Cache conda environment
uses: actions/cache@v4
with:
path: |
~/conda
key: conda
- name: Cache node_modules
uses: actions/cache@v4
with:
path: |
node_modules
key: ${{ runner.os }}-yarn-${{ hashFiles('yarn.lock') }}
restore-keys: |
${{ runner.os }}-yarn-
- name: Set environment variables
if: ${{ matrix.env }}
env:
MATRIX_ENV: ${{ toJSON(matrix.env) }}
run: |
python3 <<EOF
import json
import os
matrix_env = json.loads(os.environ["MATRIX_ENV"])
with open(os.environ["GITHUB_ENV"], "a") as f:
for key, value in matrix_env.items():
f.write(f"{key}={value}\n")
EOF
- name: Set up slurm
if: ${{ matrix.cluster_type == 'slurm' }}
run: |
export DOCKER_BUILDKIT=1
export COMPOSE_DOCKER_CLI_BUILD=1
cd ci/slurm
docker compose up -d --build
- name: Install Python (conda) ${{ matrix.python }}
if: ${{ matrix.cluster_type == 'mpi' }}
run: |
export MAMBA_ROOT_PREFIX=$HOME/conda
test -d $MAMBA_ROOT_PREFIX || mkdir $MAMBA_ROOT_PREFIX
wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj bin/micromamba
eval "$(./bin/micromamba shell hook -s posix)"
micromamba activate
micromamba install -y -c conda-forge mpich mpi4py python=${{ matrix.python }}
echo "PATH=$MAMBA_ROOT_PREFIX/bin:$PATH" >> $GITHUB_ENV
- name: Install Python ${{ matrix.python }}
if: ${{ matrix.cluster_type != 'mpi' }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python }}
- name: Install ipyparallel itself
run: |
pip install --upgrade pip
pip install --no-deps .
- name: Install Python dependencies
run: |
pip install --upgrade ipyparallel[test]
- name: Install pre-release dependencies
if: ${{ matrix.pre }}
run: |
pip install --pre --upgrade ipyparallel[test] 'https://github.com/ipython/ipykernel/archive/main.tar.gz#egg=ipykernel'
- name: Install extra Python packages
if: ${{ ! startsWith(matrix.python, '3.11') }}
run: |
pip install distributed joblib
pip install --only-binary :all: matplotlib
- name: Show environment
run: pip freeze
- name: Run tests in container ${{ matrix.container }}
if: ${{ matrix.container }}
run: echo "EXEC=docker exec -i ${{ matrix.container }}" >> $GITHUB_ENV
- name: Run ${{ matrix.cluster_type }} tests
if: ${{ matrix.cluster_type }}
run: |
${EXEC:-} pytest -v --maxfail=2 --cov=ipyparallel ipyparallel/tests/test_${{ matrix.cluster_type }}.py
- name: Run tests
if: ${{ ! matrix.cluster_type }}
run: |
pytest -v --maxfail=3 --cov=ipyparallel
- name: Fixup coverage permissions ${{ matrix.container }}
if: ${{ matrix.container }}
run: |
ls -l .coverage*
${EXEC} chmod -R a+rw .coverage*
- name: Submit codecov report
uses: codecov/codecov-action@v5
- name: Report on slurm
if: ${{ matrix.cluster_type == 'slurm' && failure() }}
run: |
set -x
docker ps -a
docker exec -i slurmctld squeue --states=all
docker exec -i slurmctld sinfo
docker logs slurmctld
docker logs c1
docker logs c2
|
