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/*
* modelcodonsemiempirical.cpp
*
* Created on: May 29, 2013
* Author: minh
*/
#include "modelcodonsemiempirical.h"
ModelCodonSemiEmpirical::ModelCodonSemiEmpirical(const char *model_name, string model_params,
StateFreqType freq, string freq_params, PhyloTree *tree, bool count_rates) :
ModelCodon(tree, count_rates)
{
init(model_name, model_params, freq, freq_params);
}
ModelCodonSemiEmpirical::~ModelCodonSemiEmpirical() {
}
void ModelCodonSemiEmpirical::init(const char *model_name, string model_params, StateFreqType freq, string freq_params) {
name = full_name = model_name;
size_t pos = name.find('+');
assert(pos != string::npos);
if (name.substr(0,3) == "ECM") {
ModelCodonEmpirical::init(name.substr(0,pos), "", FREQ_USER_DEFINED, "");
ModelCodonParametric::init(name.substr(pos), model_params, freq, freq_params);
}
}
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