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#ifndef MIC_NATIVE_H_
#define MIC_NATIVE_H_
void newviewGTRGAMMA_MIC(int tipCase,
double *x1, double *x2, double *x3, double *extEV, double *tipVector,
int *ex3, unsigned char *tipX1, unsigned char *tipX2,
int n, double *left, double *right, int *wgt, int *scalerIncrement, const pllBoolean fastScaling);
double evaluateGTRGAMMA_MIC(int *ex1, int *ex2, int *wptr,
double *x1_start, double *x2_start,
double *tipVector,
unsigned char *tipX1, const int n, double *diagptable, const pllBoolean fastScaling);
void sumGTRGAMMA_MIC(int tipCase, double *sumtable, double *x1_start, double *x2_start, double *tipVector,
unsigned char *tipX1, unsigned char *tipX2, int n);
void coreGTRGAMMA_MIC(const int upper, double *sumtable,
volatile double *ext_dlnLdlz, volatile double *ext_d2lnLdlz2, double *EIGN, double *gammaRates, double lz, int *wrptr);
// protein data
void newviewGTRGAMMAPROT_MIC(int tipCase,
double *x1, double *x2, double *x3, double *extEV, double *tipVector,
int *ex3, unsigned char *tipX1, unsigned char *tipX2,
int n, double *left, double *right, int *wgt, int *scalerIncrement, const pllBoolean fastScaling);
double evaluateGTRGAMMAPROT_MIC(int *ex1, int *ex2, int *wptr,
double *x1_start, double *x2_start,
double *tipVector,
unsigned char *tipX1, const int n, double *diagptable, const pllBoolean fastScaling);
void sumGTRGAMMAPROT_MIC(int tipCase, double *sumtable, double *x1_start, double *x2_start, double *tipVector,
unsigned char *tipX1, unsigned char *tipX2, int n);
void coreGTRGAMMAPROT_MIC(const int upper, double *sumtable,
volatile double *ext_dlnLdlz, volatile double *ext_d2lnLdlz2, double *EIGN, double *gammaRates, double lz, int *wrptr);
// protein data - LG4
void newviewGTRGAMMAPROT_LG4_MIC(int tipCase,
double *x1, double *x2, double *x3, double *extEV[4], double *tipVector[4],
unsigned char *tipX1, unsigned char *tipX2,
int n, double *left, double *right, int *wgt, int *scalerIncrement);
double evaluateGTRGAMMAPROT_LG4_MIC(int *wptr,
double *x1_start, double *x2_start,
double *tipVector[4],
unsigned char *tipX1, const int n, double *diagptable);
void sumGTRGAMMAPROT_LG4_MIC(int tipCase, double *sumtable, double *x1_start, double *x2_start, double *tipVector[4],
unsigned char *tipX1, unsigned char *tipX2, int n);
void coreGTRGAMMAPROT_LG4_MIC(const int upper, double *sumtable,
volatile double *ext_dlnLdlz, volatile double *ext_d2lnLdlz2, double *EIGN[4], double *gammaRates, double lz, int *wrptr);
#endif /* MIC_NATIVE_H_ */
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