File: test_marginal_ordered.cpp

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#include <iostream>
#include <cassert>
#include <sstream>
#define private public // MWAHAHAHAHA!!!
#include "../../IsoSpec++/unity-build.cpp"

using namespace IsoSpec;

#ifndef ISOSPEC_TESTS_SKIP_MAIN
size_t test_ordered(const char* formula, double total_prob, bool print_confs = false);

int main(int argc, char** argv)
{
	if(argc < 3)
	{
		std::cout << "Proper usage (for example): " << argv[0] << " C10000H1000O1000N1000 0.9999" << std::endl;
		std::cout << "...will print the minimal number of configurations necessary to cover 0.9999 probability of the above molecule" << std::endl;
                std::cout << argv[0] << " C10000H1000O1000N1000 0.9999 false" << std::endl;
                std::cout << "will just count them" << std::endl;
		return -1;
	}
        bool print_confs = true;

        if(argc > 3)
            print_confs = (strcmp(argv[3], "true") == 0);
	
	#ifndef ISOSPEC_TESTS_MEMSAN
	size_t no_confs = 
	#endif 
			  test_ordered(argv[1], atof(argv[2]), print_confs);

	#ifndef ISOSPEC_TESTS_MEMSAN
	std::cout << "The number of visited configurations is: " << no_confs << std::endl;
	#endif
}

#endif /* ISOSPEC_TESTS_SKIP_MAIN */


size_t test_ordered(const char* formula, double total_prob, bool print_confs)
{
	IsoOrderedGenerator i(formula);
        MarginalTrek& MT = *(i.marginalResults[0]);

	double target_prob = total_prob;

	size_t no_visited = 0;
	while(target_prob > 0.0 && MT.add_next_conf())
	{
            
            double curr_p = exp(MT._conf_lprobs[no_visited]);
	    target_prob -= curr_p;
	    no_visited += 1;
	}
	return no_visited;

}