1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
|
/*=========================================================================
Program: ITK-SNAP
Module: $RCSfile: IRISApplication.cxx,v $
Language: C++
Date: $Date: 2011/04/18 17:35:30 $
Version: $Revision: 1.37 $
Copyright (c) 2007 Paul A. Yushkevich
This file is part of ITK-SNAP
ITK-SNAP is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
-----
Copyright (c) 2003 Insight Software Consortium. All rights reserved.
See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notices for more information.
=========================================================================*/
#ifndef PREPROCESSINGFILTERCONFIGTRAITS_H
#define PREPROCESSINGFILTERCONFIGTRAITS_H
#include <SNAPImageData.h>
template <class TInput, class TOutput> class SmoothBinaryThresholdImageFilter;
template <class TInput, class TOutput> class EdgePreprocessingImageFilter;
template <class TInput, class TVectorInput, class TOutput> class GMMClassifyImageFilter;
template <class TInput, class TVectorInput, class TOutput> class RandomForestClassifyImageFilter;
class ThresholdSettings;
class EdgePreprocessingSettings;
class GaussianMixtureModel;
class RandomForestClassifier;
class SmoothBinaryThresholdFilterConfigTraits {
public:
typedef SNAPImageData InputDataType;
typedef ScalarImageWrapperBase::CommonFormatImageType GreyType;
typedef SNAPImageData::SpeedImageType SpeedType;
typedef SpeedImageWrapper OutputWrapperType;
typedef SmoothBinaryThresholdImageFilter<GreyType, SpeedType> FilterType;
// The 'parameters' for this filter consist of just the scalar image layer to
// which the filter should be applied. The actual parameters (thresholds) are
// obtained from the selected layer's user data.
typedef ThresholdSettings ParameterType;
static void AttachInputs(SNAPImageData *sid, FilterType *filter, int channel);
static void DetachInputs(FilterType *filter);
static void SetParameters(ParameterType *p, FilterType *filter, int channel);
static bool GetDefaultPreviewMode() { return true; }
// This filter always has preview ready
static bool IsPreviewable(FilterType *filter[]) { return true; }
static ScalarImageWrapperBase* GetDefaultScalarLayer(SNAPImageData *sid);
static void SetActiveScalarLayer(
ScalarImageWrapperBase *layer, FilterType *filter, int channel);
};
class EdgePreprocessingFilterConfigTraits {
public:
typedef SNAPImageData InputDataType;
typedef ScalarImageWrapperBase::CommonFormatImageType GreyType;
typedef SNAPImageData::SpeedImageType SpeedType;
typedef SpeedImageWrapper OutputWrapperType;
typedef EdgePreprocessingImageFilter<GreyType, SpeedType> FilterType;
typedef EdgePreprocessingSettings ParameterType;
static void AttachInputs(SNAPImageData *sid, FilterType *filter, int channel);
static void DetachInputs(FilterType *filter);
static void SetParameters(ParameterType *p, FilterType *filter, int channel);
static bool GetDefaultPreviewMode() { return true; }
// This filter always has preview ready
static bool IsPreviewable(FilterType *filter[]) { return true; }
static ScalarImageWrapperBase* GetDefaultScalarLayer(SNAPImageData *sid) { return NULL; }
static void SetActiveScalarLayer(
ScalarImageWrapperBase *layer, FilterType *filter, int channel) {}
};
class GMMPreprocessingFilterConfigTraits {
public:
typedef SNAPImageData InputDataType;
typedef AnatomicScalarImageWrapper::ImageType GreyScalarType;
typedef AnatomicImageWrapper::ImageType GreyVectorType;
typedef SNAPImageData::SpeedImageType SpeedType;
typedef SpeedImageWrapper OutputWrapperType;
typedef GMMClassifyImageFilter<
GreyScalarType, GreyVectorType, SpeedType> FilterType;
typedef GaussianMixtureModel ParameterType;
static void AttachInputs(SNAPImageData *sid, FilterType *filter, int channel);
static void DetachInputs(FilterType *filter);
static void SetParameters(ParameterType *p, FilterType *filter, int channel);
static bool GetDefaultPreviewMode() { return true; }
// This filter always has preview ready
static bool IsPreviewable(FilterType *filter[]) { return true; }
static ScalarImageWrapperBase* GetDefaultScalarLayer(SNAPImageData *sid) { return NULL; }
static void SetActiveScalarLayer(
ScalarImageWrapperBase *layer, FilterType *filter, int channel) {}
};
/** Traits class for random forest based preprocessing */
class RFPreprocessingFilterConfigTraits {
public:
typedef SNAPImageData InputDataType;
typedef AnatomicScalarImageWrapper::ImageType GreyScalarType;
typedef AnatomicImageWrapper::ImageType GreyVectorType;
typedef SNAPImageData::SpeedImageType SpeedType;
typedef SpeedImageWrapper OutputWrapperType;
typedef RandomForestClassifyImageFilter<
GreyScalarType, GreyVectorType, SpeedType> FilterType;
typedef RandomForestClassifier ParameterType;
static void AttachInputs(SNAPImageData *sid, FilterType *filter, int channel);
static void DetachInputs(FilterType *filter);
static void SetParameters(ParameterType *p, FilterType *filter, int channel);
static bool GetDefaultPreviewMode() { return true; }
// This filter always has preview ready
static bool IsPreviewable(FilterType *filter[]);
static ScalarImageWrapperBase* GetDefaultScalarLayer(SNAPImageData *sid) { return NULL; }
static void SetActiveScalarLayer(
ScalarImageWrapperBase *layer, FilterType *filter, int channel) {}
};
#endif // PREPROCESSINGFILTERCONFIGTRAITS_H
|
