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package uk.ac.bristol.star.cdf.test;
import java.io.File;
import java.io.IOException;
import java.util.Arrays;
import java.util.logging.Level;
import java.util.logging.Logger;
import uk.ac.bristol.star.cdf.AttributeEntry;
import uk.ac.bristol.star.cdf.CdfContent;
import uk.ac.bristol.star.cdf.CdfReader;
import uk.ac.bristol.star.cdf.GlobalAttribute;
import uk.ac.bristol.star.cdf.Variable;
import uk.ac.bristol.star.cdf.VariableAttribute;
import uk.ac.bristol.star.cdf.EpochFormatter;
/**
* Tests the contents of three of the example files
* (samples/example1.cdf, samples/example2.cdf, cdfjava/examples/test.cdf)
* from the NASA CDF software distribution.
* The assertions in this file were written by examining the output
* of cdfdump by eye.
*/
public class ExampleTest {
private static boolean assertionsOn_;
public void testExample1( File ex1file ) throws IOException {
CdfContent content = new CdfContent( new CdfReader( ex1file ) );
GlobalAttribute[] gatts = content.getGlobalAttributes();
assert gatts.length == 1;
GlobalAttribute gatt0 = gatts[ 0 ];
assert "TITLE".equals( gatt0.getName() );
assert Arrays.equals( new String[] { "CDF title", "Author: CDF" },
getEntryShapedValues( gatt0.getEntries() ) );
VariableAttribute[] vatts = content.getVariableAttributes();
assert vatts.length == 2;
assert "FIELDNAM".equals( vatts[ 0 ].getName() );
assert "UNITS".equals( vatts[ 1 ].getName() );
Variable[] vars = content.getVariables();
assert vars.length == 3;
assert "Time".equals( vars[ 0 ].getName() );
assert "Latitude".equals( vars[ 1 ].getName() );
assert "Image".equals( vars[ 2 ].getName() );
assert vars[ 0 ].getSummary().matches( "INT4 .* 0:\\[\\] T/" );
assert vars[ 1 ].getSummary().matches( "INT2 .* 1:\\[181\\] T/T" );
assert vars[ 2 ].getSummary().matches( "INT4 .* 2:\\[10,20\\] T/TT" );
assert vatts[ 1 ].getEntry( vars[ 0 ] ).getShapedValue()
.equals( "Hour/Minute" );
assert vatts[ 1 ].getEntry( vars[ 1 ] ) == null;
assert readShapedRecord( vars[ 0 ], 0, true )
.equals( new Integer( 23 ) );
assert readShapedRecord( vars[ 0 ], 1, true )
.equals( new Integer( 24 ) );
assert readShapedRecord( vars[ 0 ], 2, true ) == null;
assert Arrays.equals( (short[]) readShapedRecord( vars[ 1 ], 0, true ),
shortSequence( -90, 1, 181 ) );
assert Arrays.equals( (short[]) readShapedRecord( vars[ 1 ], 0, false ),
shortSequence( -90, 1, 181 ) );
assert readShapedRecord( vars[ 1 ], 1, true ) == null;
assert readShapedRecord( vars[ 1 ], 2, false ) == null;
assert Arrays.equals( (int[]) readShapedRecord( vars[ 2 ], 0, true ),
intSequence( 0, 1, 200 ) );
assert Arrays.equals( (int[]) readShapedRecord( vars[ 2 ], 1, true ),
intSequence( 200, 1, 200 ) );
assert Arrays.equals( (int[]) readShapedRecord( vars[ 2 ], 2, true ),
intSequence( 400, 1, 200 ) );
int[] sideways = (int[]) readShapedRecord( vars[ 2 ], 0, false );
assert sideways[ 0 ] == 0;
assert sideways[ 1 ] == 20;
assert sideways[ 2 ] == 40;
assert sideways[ 10 ] == 1;
assert sideways[ 199 ] == 199;
}
public void testExample2( File ex2file ) throws IOException {
CdfContent content = new CdfContent( new CdfReader( ex2file ) );
GlobalAttribute[] gatts = content.getGlobalAttributes();
assert gatts.length == 1;
GlobalAttribute gatt0 = gatts[ 0 ];
assert "TITLE".equals( gatt0.getName() );
assert "An example CDF (2)."
.equals( ((String) gatt0.getEntries()[ 0 ].getShapedValue())
.trim() );
VariableAttribute[] vatts = content.getVariableAttributes();
assert vatts.length == 9;
VariableAttribute fnVatt = vatts[ 0 ];
VariableAttribute vminVatt = vatts[ 1 ];
VariableAttribute vmaxVatt = vatts[ 2 ];
assert fnVatt.getName().equals( "FIELDNAM" );
assert vminVatt.getName().equals( "VALIDMIN" );
assert vmaxVatt.getName().equals( "VALIDMAX" );
Variable[] vars = content.getVariables();
assert vars.length == 4;
Variable timeVar = vars[ 0 ];
Variable lonVar = vars[ 1 ];
Variable latVar = vars[ 2 ];
Variable tempVar = vars[ 3 ];
assert timeVar.getName().equals( "Time" );
assert lonVar.getName().equals( "Longitude" );
assert latVar.getName().equals( "Latitude" );
assert tempVar.getName().equals( "Temperature" );
assert timeVar.getSummary().matches( "INT4 .* 0:\\[\\] T/" );
assert lonVar.getSummary().matches( "REAL4 .* 1:\\[2\\] F/T" );
assert latVar.getSummary().matches( "REAL4 .* 1:\\[2\\] F/T" );
assert tempVar.getSummary().matches( "REAL4 .* 2:\\[2,2\\] T/TT" );
assert timeVar.getRecordCount() == 24;
assert tempVar.getRecordCount() == 24;
assert lonVar.getRecordCount() == 1;
assert latVar.getRecordCount() == 1;
assert ((String) fnVatt.getEntry( timeVar ).getShapedValue()).trim()
.equals( "Time of observation" );
assert vminVatt.getEntry( timeVar ).getShapedValue()
.equals( new Integer( 0 ) );
assert vmaxVatt.getEntry( timeVar ).getShapedValue()
.equals( new Integer( 2359 ) );
assert vminVatt.getEntry( lonVar ).getShapedValue()
.equals( new Float( -180f ) );
assert vmaxVatt.getEntry( lonVar ).getShapedValue()
.equals( new Float( 180f ) );
assert readShapedRecord( timeVar, 0, true )
.equals( new Integer( 0 ) );
assert readShapedRecord( timeVar, 23, false )
.equals( new Integer( 2300 ) );
float[] lonVal = new float[] { -165f, -150f };
float[] latVal = new float[] { 40f, 30f };
for ( int irec = 0; irec < 24; irec++ ) {
assert Arrays.equals( (float[]) readShapedRecord( lonVar, irec,
true ),
lonVal );
assert Arrays.equals( (float[]) readShapedRecord( latVar, irec,
false ),
latVal );
}
assert Arrays.equals( (float[]) readShapedRecord( tempVar, 0, true ),
new float[] { 20f, 21.7f, 19.2f, 20.7f } );
assert Arrays.equals( (float[]) readShapedRecord( tempVar, 23, true ),
new float[] { 21f, 19.5f, 18.4f, 22f } );
assert Arrays.equals( (float[]) readShapedRecord( tempVar, 23, false ),
new float[] { 21f, 18.4f, 19.5f, 22f } );
}
public void testTest( File testFile ) throws IOException {
CdfContent content = new CdfContent( new CdfReader( testFile ) );
GlobalAttribute[] gatts = content.getGlobalAttributes();
assert gatts.length == 5;
assert "Project".equals( gatts[ 0 ].getName() );
GlobalAttribute gatt1 = gatts[ 1 ];
assert "PI".equals( gatt1.getName() );
assert Arrays.equals( new String[] { null, null, null, "Ernie Els" },
getEntryShapedValues( gatt1.getEntries() ) );
GlobalAttribute gatt2 = gatts[ 2 ];
assert "Test".equals( gatt2.getName() );
AttributeEntry[] tents = gatt2.getEntries();
assert tents[ 0 ].getShapedValue().equals( new Double( 5.3432 ) );
assert tents[ 1 ] == null;
assert tents[ 2 ].getShapedValue().equals( new Float( 5.5f ) );
assert Arrays.equals( (float[]) tents[ 3 ].getShapedValue(),
new float[] { 5.5f, 10.2f } );
assert Arrays.equals( (float[]) tents[ 3 ].getRawValue(),
new float[] { 5.5f, 10.2f } );
assert ((Byte) tents[ 4 ].getShapedValue()).byteValue() == 1;
assert Arrays.equals( (byte[]) tents[ 5 ].getShapedValue(),
new byte[] { (byte) 1, (byte) 2, (byte) 3 } );
assert ((Short) tents[ 6 ].getShapedValue()).shortValue() == -32768;
assert Arrays.equals( (short[]) tents[ 7 ].getShapedValue(),
new short[] { (short) 1, (short) 2 } );
assert ((Integer) tents[ 8 ].getShapedValue()).intValue() == 3;
assert Arrays.equals( (int[]) tents[ 9 ].getShapedValue(),
new int[] { 4, 5 } );
assert "This is a string".equals( tents[ 10 ].getShapedValue() );
assert ((Long) tents[ 11 ].getShapedValue()).longValue() == 4294967295L;
assert Arrays.equals( (long[]) tents[ 12 ].getShapedValue(),
new long[] { 4294967295L, 2147483648L } );
assert ((Integer) tents[ 13 ].getShapedValue()).intValue() == 65535;
assert Arrays.equals( (int[]) tents[ 14 ].getShapedValue(),
new int[] { 65535, 65534 } );
assert ((Short) tents[ 15 ].getShapedValue()).shortValue() == 255;
assert Arrays.equals( (short[]) tents[ 16 ].getShapedValue(),
new short[] { 255, 254 } );
EpochFormatter epf = new EpochFormatter();
GlobalAttribute gatt3 = gatts[ 3 ];
assert "TestDate".equals( gatt3.getName() );
assert "2002-04-25T00:00:00.000"
.equals( epf
.formatEpoch( ((Double)
gatt3.getEntries()[ 1 ].getShapedValue())
.doubleValue() ) );
assert "2008-02-04T06:08:10.012014016"
.equals( epf
.formatTimeTt2000( ((Long) gatt3.getEntries()[ 2 ]
.getShapedValue())
.longValue() ) );
double[] epDate = (double[])
gatts[ 4 ].getEntries()[ 0 ].getShapedValue();
assert "2004-05-13T15:08:11.022033044055"
.equals( epf.formatEpoch16( epDate[ 0 ], epDate[ 1 ] ) );
Variable[] vars = content.getVariables();
Variable latVar = vars[ 0 ];
assert "Latitude".equals( latVar.getName() );
assert Arrays.equals( new byte[] { (byte) 1, (byte) 2, (byte) 3 },
(byte[]) readShapedRecord( latVar, 0, true ) );
assert Arrays.equals( new byte[] { (byte) 1, (byte) 2, (byte) 3 },
(byte[]) readShapedRecord( latVar, 100, true ) );
Variable lat1Var = vars[ 1 ];
assert "Latitude1".equals( lat1Var.getName() );
assert Arrays.equals( new short[] { (short) 100, (short) 128,
(short) 255 },
(short[]) readShapedRecord( lat1Var, 2, true ) );
Variable longVar = vars[ 2 ];
assert "Longitude".equals( longVar.getName() );
assert Arrays.equals( new short[] { (short) 100, (short) 200,
(short) 300 },
(short[]) readShapedRecord( longVar, 0, true ) );
assert Arrays.equals( new short[] { (short) -32767, (short) -32767,
(short) -32767 },
(short[]) readShapedRecord( longVar, 1, true ) );
Variable nameVar = vars[ 8 ];
assert "Name".equals( nameVar.getName() );
assert Arrays.equals( new String[] { "123456789 ", "13579 " },
(String[]) readShapedRecord( nameVar, 0, true ) );
Variable tempVar = vars[ 9 ];
assert "Temp".equals( tempVar.getName() );
assert Arrays.equals( new float[] { 55.5f, -1e30f, 66.6f },
(float[]) readShapedRecord( tempVar, 0, true ) );
assert Arrays.equals( new float[] { -1e30f, -1e30f, -1e30f },
(float[]) readShapedRecord( tempVar, 1, true ) );
Variable epVar = vars[ 15 ];
assert "ep".equals( epVar.getName() );
assert "1999-03-05T05:06:07.100"
.equals( epf
.formatEpoch( (Double) readShapedRecord( epVar, 0 ) ) );
Variable ep16Var = vars[ 16 ];
assert "ep16".equals( ep16Var.getName() );
double[] ep2 = (double[]) readShapedRecord( ep16Var, 1, true );
assert "2004-12-29T16:56:24.031411522634"
.equals( epf.formatEpoch16( ep2[ 0 ], ep2[ 1 ] ) );
Variable ttVar = vars[ 18 ];
assert "tt2000".equals( ttVar.getName() );
assert "2015-06-30T23:59:58.123456789"
.equals( epf.formatTimeTt2000( (Long)
readShapedRecord( ttVar, 0 ) ) );
assert "2015-06-30T23:59:60.123456789"
.equals( epf.formatTimeTt2000( (Long)
readShapedRecord( ttVar, 2 ) ) );
assert "2015-07-01T00:00:00.123456789"
.equals( epf.formatTimeTt2000( (Long)
readShapedRecord( ttVar, 3 ) ) );
}
private Object readShapedRecord( Variable var, int irec, boolean rowMajor )
throws IOException {
return var.readShapedRecord( irec, rowMajor,
var.createRawValueArray() );
}
private Object readShapedRecord( Variable var, int irec )
throws IOException {
return readShapedRecord( var, irec, true );
}
private short[] shortSequence( int start, int step, int count ) {
short[] array = new short[ count ];
for ( int i = 0; i < count; i++ ) {
array[ i ] = (short) ( start + i * step );
}
return array;
}
private int[] intSequence( int start, int step, int count ) {
int[] array = new int[ count ];
for ( int i = 0; i < count; i++ ) {
array[ i ] = start + i * step;
}
return array;
}
private static Object[] getEntryShapedValues( AttributeEntry[] entries ) {
int nent = entries.length;
Object[] vals = new Object[ nent ];
for ( int ie = 0; ie < nent; ie++ ) {
AttributeEntry entry = entries[ ie ];
vals[ ie ] = entry == null ? null : entry.getShapedValue();
}
return vals;
}
private static boolean checkAssertions() {
assertionsOn_ = true;
return true;
}
/**
* Main method. Run with locations of the following files from the
* NASA CDF software distribution as arguments:
* samples/example1.cdf
* samples/example2.cdf
* cdfjava/examples/test.cdf
* The versions of these files assumed here probably correspond to
* CDF V3.6.5 (hence the above files are in subdirs of cdf36_5-dist/).
* However these files were supplied by the CDF office prior to
* V3.6.5 release, so changes are possible.
*
* <p>Use -help for help.
*
* <p>Tests are made using java assertions, so this test must be
* run with java assertions enabled. If it's not, it will fail anyway.
*/
public static void main( String[] args ) throws IOException {
assert checkAssertions();
if ( ! assertionsOn_ ) {
throw new RuntimeException( "Assertions disabled - bit pointless" );
}
String usage = "Usage: " + ExampleTest.class.getName()
+ " example1.cdf example2.cdf";
if ( args.length != 3 ) {
System.err.println( usage );
System.exit( 1 );
}
File ex1 = new File( args[ 0 ] );
File ex2 = new File( args[ 1 ] );
File test = new File( args[ 2 ] );
if ( ! ex1.canRead() || ! ex2.canRead() || ! test.canRead() ) {
System.err.println( usage );
System.exit( 1 );
}
ExampleTest extest = new ExampleTest();
extest.testExample1( ex1 );
extest.testExample2( ex2 );
extest.testTest( test );
}
}
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