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purpose "Statistics"
package "jellyfish stats"
description "Display some statistics about the k-mers in the hash:
Unique: Number of k-mers which occur only once.
Distinct: Number of k-mers, not counting multiplicity.
Total: Number of k-mers, including multiplicity.
Max_count: Maximum number of occurrence of a k-mer.
"
option("recompute", "r") {
description "Recompute"
flag; off; hidden }
option("lower-count", "L") {
description "Don't consider k-mer with count < lower-count"
uint64; default 0 }
option("upper-count", "U") {
description "Don't consider k-mer with count > upper-count (2^64)"
uint64 }
option("verbose", "v") {
description "Verbose"
flag; off }
option("output", "o") {
description "Output file"
c_string }
arg("db") {
description "Jellyfish database"
c_string; typestr "path" }
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