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#! /bin/sh
cd tests
. ./compat.sh
sort -k2,2 > ${pref}.md5sum <<EOF
bbceae352707eaa945ce2057137f3a7a ${pref}.histo
c697577f78593fef303b5fcaad86e336 ${pref}.stats
EOF
echo "Count on a very small file" && \
${DIR}/generate_sequence -v -s 2609132522 -o small 148 && \
$JF count -m 20 -s 1M -t $nCPUs -o ${pref} -C --timing ${pref}.timing --stats ${pref}.stats small.fa && \
$JF histo ${pref}_0 > ${pref}.histo && \
check ${pref}.md5sum
RET=$?
echo "Small timing"; cat ${pref}.timing
exit $RET
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