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Source: kalign
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>, Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13), libsimde-dev, cmake
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/med-team/kalign
Vcs-Git: https://salsa.debian.org/med-team/kalign.git
Homepage: https://msa.sbc.su.se/
Rules-Requires-Root: no
Package: kalign
Architecture: any
Built-Using: ${simde:Built-Using}
Depends: ${misc:Depends}, ${shlibs:Depends}
Enhances: bioperl-run, t-coffee
Description: Global and progressive multiple sequence alignment
Kalign is a command line tool to perform multiple alignment of
biological sequences. It employs the Muth-Manber string-matching
algorithm, to improve both the accuracy and speed of the alignment.
It uses global, progressive alignment approach, enriched by employing
an approximate string-matching algorithm to calculate sequence
distances and by incorporating local matches into the otherwise global
alignment.
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