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Source: khmer
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Michael R. Crusoe <michael.crusoe@gmail.com>,
Kevin Murray <spam@kdmurray.id.au>
Section: science
Priority: optional
Build-Depends: debhelper (>= 9),
dh-python,
dh-exec,
python3 (>= 3.3),
python3-dev (>= 3.3),
python3-all-dev (>= 3.3),
python3-setuptools (>= 3.3),
python3-screed,
python3-nose,
python3-sphinx,
python3-sphinxcontrib.autoprogram,
zlib1g-dev,
libbz2-dev,
asciidoctor
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/khmer.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/khmer.git
Homepage: http://khmer.readthedocs.org
X-Python-Version: 3.4
Package: khmer-common
Architecture: all
Multi-Arch: foreign
Depends: file,
${misc:Depends},
${sphinxdoc:Depends}
Description: common files for the khmer project tools
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as
that produced by the Illumina platform. khmer takes a k-mer-centric
approach to sequence analysis, hence the name.
.
This package contains common files for liboxli and khmer
Package: khmer
Architecture: amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64el any-sparc64
Multi-Arch: same
Depends: khmer-common,
python3 (>= 3.3),
python3-screed (<< 1.0),
${shlibs:Depends},
${misc:Depends},
${python3:Depends}
Description: in-memory DNA sequence kmer counting, filtering & graph traversal
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.
Package: liboxli1
Architecture: amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64el any-sparc64
Multi-Arch: same
Section: libs
Depends: khmer-common,
${shlibs:Depends},
${misc:Depends}
Pre-Depends: ${misc:Pre-Depends}
Description: in-memory DNA sequence analysis library from the khmer project
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.
.
This package contains the low-level C++ library.
Package: liboxli-dev
Architecture: amd64 any-arm64 any-mips64 any-mips64el any-ia64 any-ppc64el any-sparc64
Multi-Arch: same
Section: libdevel
Depends: liboxli1 (= ${binary:Version}),
${misc:Depends},
khmer-common
Description: in-memory DNA sequence analysis dev library
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.
.
This package contains the low-level C++ library headers and static archive.
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