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#!/usr/bin/make -f
export DH_VERBOSE=1
export PYBUILD_NAME=khmer
export PYBUILD_INSTALL_ARGS='--install-scripts=/usr/lib/khmer/bin'
export PYBUILD_DESTDIR_python3=debian/khmer
# Force C++ library build to use Debian zlib1g-dev/libbz2-dev
export USE_SYSTEM_ZLIB=true
export USE_SYSTEM_LIBBZ2=true
export PACKAGE_VERSION := $(shell dpkg-parsechangelog | egrep '^Version:' | cut -f 2 -d ' ')
export HOME=$(shell echo $$PWD"/fakehome")
%:
dh $@ --with python3,sphinxdoc --buildsystem=pybuild --parallel
override_dh_auto_build:
dh_auto_build
ln -sf "`pwd`"/.pybuild/pythonX.Y_*/build/khmer/*.so khmer && \
./setup.py develop --user && ./setup.py build_sphinx
asciidoctor --backend manpage -a reproducible debian/khmer.1.adoc
cd lib && $(MAKE) clean all
override_dh_auto_test:
dh_auto_install
PYBUILD_SYSTEM=custom \
PYBUILD_TEST_ARGS="cd {dir}; export PATH={destdir}/usr/lib/khmer/bin:$$PATH ; \
cd {build_dir}; {interpreter} -m nose --attr \
'!known_failing,!jenkins,!huge'" dh_auto_test
override_dh_auto_clean:
#dh_auto_clean
rm -f khmer/*.so
rm -f debian/*.1
cd lib && $(MAKE) clean
rm -Rf fakehome
override_dh_install:
cd lib && $(MAKE) PREFIX=../debian/tmp install
dh_install
find debian/khmer -name .gitignore -delete
get-orig-source:
uscan --verbose --force-download --repack --compression xz
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