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khmer 2.0%2Bdfsg-10
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 77,428 kB
  • ctags: 18,628
  • sloc: cpp: 99,718; python: 15,920; makefile: 512; sh: 141; xml: 19

Folder: scripts

d .. (parent)
- - rw-r--r-- 6 .gitignore
- - rwxr-xr-x 8,555 abundance-dist-single.py
- - rwxr-xr-x 6,918 abundance-dist.py
- - rwxr-xr-x 4,865 annotate-partitions.py
- - rwxr-xr-x 5,289 count-median.py
- - rwxr-xr-x 9,427 do-partition.py
- - rwxr-xr-x 3,981 extract-long-sequences.py
- - rwxr-xr-x 7,604 extract-paired-reads.py
- - rwxr-xr-x 10,704 extract-partitions.py
- - rwxr-xr-x 4,369 fastq-to-fasta.py
- - rwxr-xr-x 6,275 filter-abund-single.py
- - rwxr-xr-x 7,317 filter-abund.py
- - rwxr-xr-x 4,643 filter-stoptags.py
- - rwxr-xr-x 7,531 find-knots.py
- - rwxr-xr-x 5,715 interleave-reads.py
- - rwxr-xr-x 2,499 load-graph.py
- - rwxr-xr-x 8,399 load-into-counting.py
- - rwxr-xr-x 6,289 make-initial-stoptags.py
- - rwxr-xr-x 4,472 merge-partitions.py
- - rwxr-xr-x 16,273 normalize-by-median.py
- - rwxr-xr-x 1,929 oxli
- - rwxr-xr-x 7,328 partition-graph.py
- - rwxr-xr-x 7,689 readstats.py
- - rwxr-xr-x 9,251 sample-reads-randomly.py
- - rwxr-xr-x 8,303 split-paired-reads.py
- - rwxr-xr-x 14,411 trim-low-abund.py
- - rwxr-xr-x 6,747 unique-kmers.py