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khmer 2.1.2%2Bdfsg-8
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 59,064 kB
  • sloc: cpp: 102,051; python: 19,654; ansic: 677; makefile: 578; sh: 167; xml: 19; javascript: 16

Folder: scripts

d .. (parent)
- - rw-r--r-- 6 .gitignore
- - rwxr-xr-x 8,977 abundance-dist-single.py
- - rwxr-xr-x 6,881 abundance-dist.py
- - rwxr-xr-x 4,582 annotate-partitions.py
- - rwxr-xr-x 5,028 count-median.py
- - rwxr-xr-x 8,442 do-partition.py
- - rwxr-xr-x 3,720 extract-long-sequences.py
- - rwxr-xr-x 7,409 extract-paired-reads.py
- - rwxr-xr-x 12,937 extract-partitions.py
- - rwxr-xr-x 4,095 fastq-to-fasta.py
- - rwxr-xr-x 7,539 filter-abund-single.py
- - rwxr-xr-x 7,134 filter-abund.py
- - rwxr-xr-x 4,364 filter-stoptags.py
- - rwxr-xr-x 7,392 find-knots.py
- - rwxr-xr-x 5,800 interleave-reads.py
- - rwxr-xr-x 2,511 load-graph.py
- - rwxr-xr-x 8,738 load-into-counting.py
- - rwxr-xr-x 6,293 make-initial-stoptags.py
- - rwxr-xr-x 4,188 merge-partitions.py
- - rwxr-xr-x 16,455 normalize-by-median.py
- - rwxr-xr-x 1,929 oxli
- - rwxr-xr-x 6,201 partition-graph.py
- - rwxr-xr-x 7,505 readstats.py
- - rwxr-xr-x 9,180 sample-reads-randomly.py
- - rwxr-xr-x 8,108 split-paired-reads.py
- - rwxr-xr-x 21,044 trim-low-abund.py
- - rwxr-xr-x 6,395 unique-kmers.py