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Source: kineticstools
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Étienne Mollier <emollier@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3,
python3-setuptools,
python3-docutils,
python3-pbcore,
python3-pbcommand,
python3-numpy,
python3-h5py,
python3-scipy,
python3-uritools <!nocheck>,
python3-pytest <!nocheck>,
python3-pytest-runner <!nocheck>,
python3-pytest-xdist <!nocheck>
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/kineticstools
Vcs-Git: https://salsa.debian.org/med-team/kineticstools.git
Homepage: https://github.com/PacificBiosciences/kineticsTools
Rules-Requires-Root: no
Package: kineticstools
Architecture: all
Depends: ${misc:Depends},
${python3:Depends},
python3-kineticstools (>= ${source:Version})
Description: detection of DNA modifications
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
This package is part of the SMRTAnalysis suite.
Package: kineticstools-data
Architecture: all
Multi-Arch: foreign
Depends: ${misc:Depends}
Description: detection of DNA modifications -- data files
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
Kineticstools is part of the SMRTAnalysis suite.
This package contains the package data files.
Package: python3-kineticstools
Architecture: any
Section: python
Depends: ${misc:Depends},
${shlibs:Depends},
${python3:Depends},
kineticstools-data (= ${source:Version})
Suggests: python3-pybigwig
Description: detection of DNA modifications (Python 3 library)
Tools for detecting DNA modifications from single molecule, real-time (SMRT®)
sequencing data. This tool implements the P_ModificationDetection module in
SMRT® Portal, used by the RS_Modification_Detection and
RS_Modifications_and_Motif_Detection protocol. Researchers interested in
understanding or extending the modification detection algorithms can use these
tools as a starting point.
.
This package is part of the SMRTAnalysis suite and contains the backend
Python 3 library.
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