1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
#!/usr/bin/perl -w
if(@ARGV !=2){
print "format:remove_breakline.pl input.txt output.txt k\n";
print "Please specify the names of the input file and the output file\n";
exit 1;
}
$infile1=shift; #idio me $infile=$ARGV[0]
#idio me $outfile= $ARGV[1]
$outfile=shift;
open(IN, "$infile1") || die "Cannot open: $!\n";
open(OUT, ">$outfile") || die "Cannot open: $!\n";
while($line=<IN>){
if ($line=~m/(\w*)>(.*)none/){
print OUT "$1\n";
print OUT ">$2";
print OUT "\n";
#print OUT "\n";
}
#else{
elsif($line=~m/(\w+)/){
print OUT "$1\n";
}
#chomp( $line);
#$k++;
#$line=~ s/\n//s;
#print OUT $line;
#next $line if($line=~m/^>(.*)/);
#print OUT " \n" ;
#}
}
close(OUT);
close(IN);
|
