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/* Philip T.L.C. Clausen Jan 2017 plan@dtu.dk */
/*
* Copyright (c) 2017, Philip Clausen, Technical University of Denmark
* All rights reserved.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#define _XOPEN_SOURCE 600
#include <stdlib.h>
#include "pherror.h"
#include "seqmenttree.h"
SeqmentTree * initializeSeqmentTree(const long unsigned size) {
SeqmentTree *dest;
dest = smalloc(sizeof(SeqmentTree));
dest->n = 0;
dest->root = smalloc((dest->size = size) * sizeof(SeqmentTrees));
return dest;
}
SeqmentTree * initSeqmentTree(SeqmentTree *src, const unsigned start, const unsigned end) {
SeqmentTrees *node;
if(!src) {
src = initializeSeqmentTree(64);
}
src->n = 1;
node = src->root;
node->start = start;
node->end = end;
node->covered = end - start;
node->branch[0] = 0;
node->branch[1] = 0;
return src;
}
SeqmentTrees * rcpSeqmentTree(SeqmentTree *src, SeqmentTrees *branch) {
SeqmentTrees *dest;
/* cp branch */
dest = (src->root + src->n++);
*dest = *branch;
/* add subtree of the branch */
if(*(branch->branch)) {
branch->branch[0] = rcpSeqmentTree(src, branch->branch[0]);
branch->branch[1] = rcpSeqmentTree(src, branch->branch[1]);
}
return dest;
}
void reallocSeqmentTree(SeqmentTree *src, const long unsigned size) {
SeqmentTrees *org;
/* save old tree */
org = src->root;
/* allocate new tree */
src->size = size;
src->root = smalloc(src->size * sizeof(SeqmentTrees));
/* cp old tree into new */
src->n = 0;
src->root = rcpSeqmentTree(src, org);
/* clean up */
free(org);
}
void resizeSeqmentTree(SeqmentTree *src) {
SeqmentTrees *org;
/* save old tree */
org = src->root;
/* allocate new tree */
src->size <<= 1;
src->root = smalloc(src->size * sizeof(SeqmentTrees));
/* cp old tree into new */
src->n = 0;
src->root = rcpSeqmentTree(src, org);
/* clean up */
free(org);
}
unsigned addSeqmentTrees(SeqmentTrees *root, SeqmentTrees *node) {
unsigned pos, covered;
SeqmentTrees *bud;
if(*(root->branch)) { /* search */
/* adjust limits of root */
if(node->start < root->start && root->end < node->end) {
root->start = node->start;
root->end = node->end;
root->covered = node->covered;
node->covered = 0;
*(root->branch) = 0;
return root->covered;
} else if(root->end < node->end) {
root->end = node->end;
} else if(node->start < root->start) {
root->start = node->start;
}
/* search tree */
pos = root->branch[1]->start;
if(node->end < pos) { /* left */
root->covered = root->branch[1]->covered + addSeqmentTrees(root->branch[0], node);
} else if(pos <= node->start) { /* right */
root->covered = root->branch[0]->covered + addSeqmentTrees(root->branch[1], node);
} else { /* split */
/* calculate right side */
pos = node->start;
node->start = root->branch[0]->end + 1;
node->covered = node->end - node->start;
covered = addSeqmentTrees(root->branch[1], node);
/* calculate left side */
node->start = pos;
node->end = root->branch[0]->end;
node->covered = node->end - node->start;
root->covered = covered + addSeqmentTrees(root->branch[0], node);
}
} else if(node->end < root->start || root->end < node->start) { /* new leaf */
/* create and grow bud */
bud = node + 1;
bud->start = root->start;
bud->end = root->end;
bud->covered = root->covered;
*(bud->branch) = 0;
if(node->end < root->start) {
/* right bud */
root->start = node->start;
root->branch[0] = node;
root->branch[1] = bud;
} else {
/* left bud */
root->end = node->end;
root->branch[0] = bud;
root->branch[1] = node;
}
root->covered += node->covered;
} else { /* extend leaf */
if(node->start < root->start) { /* extend left */
root->start = node->start;
}
if(root->end < node->end) { /* extend right */
root->end = node->end;
}
node->covered = 0;
root->covered = root->end - root->start;
}
return root->covered;
}
int growSeqmentTree(SeqmentTree *src, const unsigned start, const unsigned end) {
SeqmentTrees *node;
/* make room for new anker */
if(src->size <= src->n + 2) {
resizeSeqmentTree(src);
} else if(src->n == 0) {
initSeqmentTree(src, start, end);
return end - start;
}
/* make new leaf */
node = src->root + src->n;
node->start = start;
node->end = end;
node->covered = end - start;
*(node->branch) = 0;
src->root->covered = addSeqmentTrees(src->root, node);
if(node->covered) {
src->n += 2;
}
return src->root->covered;
}
unsigned queSeqmentTree(SeqmentTrees *src, const unsigned start, const unsigned end) {
if(end < src->start || src->end < start) {
/* miss */
return 0;
} else if(start <= src->start && src->end <= end) {
/* leaf covered by query */
return src->covered;
} else if(*(src->branch)) {
/* check next */
return queSeqmentTree(src->branch[0], start, end) + queSeqmentTree(src->branch[1], start, end);
} else if(src->start <= start && end <= src->end) {
return end - start;
} else if(src->start <= start && start < src->end) {
/* left side */
return src->end - start;
} else if(src->start < end && end <= src->end) {
/* right side */
return end - src->start;
}
return 0;
}
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