package info (click to toggle)
kraken 1.1.1-4
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 4,636 kB
  • sloc: cpp: 1,924; perl: 1,563; sh: 470; makefile: 51

Folder: scripts

d .. (parent)
- - rwxr-xr-x 1,753 add_to_library.sh
- - rwxr-xr-x 7,111 build_kraken_db.sh
- - rwxr-xr-x 1,268 check_for_jellyfish.sh
- - rwxr-xr-x 1,388 clean_db.sh
- - rwxr-xr-x 1,592 convert_gb_to_fa.pl
- - rwxr-xr-x 1,899 cp_into_tempfile.pl
- - rwxr-xr-x 3,089 download_genomic_library.sh
- - rwxr-xr-x 1,316 download_taxonomy.sh
- - rwxr-xr-x 8,840 kraken
- - rwxr-xr-x 8,241 kraken-build
- - rwxr-xr-x 3,740 kraken-filter
- - rwxr-xr-x 5,402 kraken-mpa-report
- - rwxr-xr-x 4,545 kraken-report
- - rwxr-xr-x 4,034 kraken-translate
- - rw-r--r-- 3,416 krakenlib.pm
- - rwxr-xr-x 1,789 lookup_accession_numbers.pl
- - rwxr-xr-x 5,434 read_merger.pl
- - rwxr-xr-x 1,452 report_gi_numbers.pl
- - rwxr-xr-x 5,560 rsync_from_ncbi.pl
- - rwxr-xr-x 1,665 scan_fasta_file.pl
- - rwxr-xr-x 1,815 shrink_db.sh
- - rwxr-xr-x 1,642 standard_installation.sh
- - rwxr-xr-x 2,514 upgrade_db.sh
- - rwxr-xr-x 1,518 verify_gi_numbers.pl