File: HIV_2.fa

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>kraken:taxid|11709|NC_001722.1 Human immunodeficiency virus 2, complete genome
TGCAAGGGATGTTTTACAGTAGGAGGAGACATAGAATCCTAGACATATACCTAGAAAAAGAGGAAGGGATAATACCAGAT
TGGCAGAATTATACTCATGGGCCAGGAGTAAGGTACCCAATGTACTTCGGGTGGCTGTGGAAGCTAGTATCAGTAGAACT
CTCACAAGAGGCAGAGGAAGATGAGGCCAACTGCTTAGTACACCCAGCACAAACAAGCAGACATGATGATGAGCATGGGG
AGACATTAGTGTGGCAGTTTGACTCCATGCTGGCCTATAACTACAAGGCCTTCACTCTGTACCCAGAAGAGTTTGGGCAC
AAGTCAGGATTGCCAGAGAAAGAATGGAAGGCAAAACTGAAAGCAAGAGGGATACCATATAGTGAATAACAGGAACAACC
ATACTTGGTCAAGGCAGGAAGTAGCTACTAAGAAACAGCTGAGGCTGCAGGGACTTTCCAGAAGGGGCTGTAACCAAGGG
AGGGACATGGGAGGAGCTGGTGGGGAACGCCCTCATACTTACTGTATAAATGTACCCGCTTCTTGCATTGTATTCAGTCG
CTCTGCGGAGAGGCTGGCAGATCGAGCCCTGAGAGGTTCTCTCCAGCACTAGCAGGTAGAGCCTGGGTGTTCCCTGCTGG
ACTCTCACCAGTACTTGGCCGGTACTGGGCAGACGGCTCCACGCTTGCTTGCTTAAAGACCTCTTCAATAAAGCTGCCAG
TTAGAAGCAAGTTAAGTGTGTGTTCCCATCTCTCCTAGTCGCCGCCTGGTCATTCGGTGTTCATCTGAGTAACAAGACCC
TGGTCTGTTAGGACCCTTCTCGCTTTGGGAATCCAAGGCAGGAAAATCCCTAGCAGGTTGGCGCCCGAACAGGGACTTGA
AGAGGACTGAGAAGCCCTGGAACTCGGCTGAGTGAAGGCAGTAAGGGCGGCAGGAACAAACCACGACGGAGTGCTCCTAG
AAAGGCGCGGGCCGAGGTACCAAAGGCGGCGTGTGGAGCGGGAGTGAAAGAGGCCTCCGGGTGAAGGTAAGTACCTACAC
CAAAAACTGTAGCCAGAAAAGGCTTGTTATCCTACCTTTAGACAGGTAGAAGATTGTGGGAGATGGGCGCGAGAAACTCC
GTCTTGAGAGGGAAAAAAGCAGACGAATTAGAAAAAGTTAGGTTACGGCCCGGCGGAAAGAAAAAGTACAGGTTAAAACA
TATTGTGTGGGCAGCGAATGAATTGGATAAATTCGGATTGGCAGAGAGCCTGTTGGAGTCAAAAGAAGGTTGCCAAAAGA
TTCTCAGAGTTTTAGATCCATTAGTACCAACAGGGTCAGAAAATTTAAAAAGCCTTTTTAATACCGTCTGCGTCATTTGG
TGCTTGCACGCAGAAGAGAAAGTGAAAGATACTGAGGAAGCAAAGAAACTAGCACAGAGACATCTAGTGGCAGAAACTGG
AACTGCAGAGAAAATGCCAAATACAAGTAGACCAACAGCACCACCTAGTGGGAAAAGAGGAAACTACCCCGTGCAACAAG
CGGGTGGCAACTATGTCCATGTGCCACTGAGCCCCCGAACTCTAAATGCATGGGTAAAATTAGTGGAGGAAAAGAAGTTC
GGGGCAGAAGTAGTGCCAGGATTTCAGGCACTCTCAGAAGGCTGCACGCCCTATGATATTAATCAAATGCTTAATTGTGT
GGGCGATCACCAAGCAGCTATGCAAATAATCAGAGAGATTATTAATGAAGAAGCAGCAGACTGGGATTCGCAGCACCCAA
TACCAGGCCCCTTACCAGCAGGACAGCTCAGAGACCCAAGAGGGTCTGACATAGCAGGAACAACAAGCACAGTAGATGAA
CAGATCCAGTGGATGTATAGGCCACAAAATCCCGTACCGGTAGGGAACATCTACAGAAGATGGATCCAAATAGGGCTGCA
AAAGTGTGTCAGAAAGTACAACCCAACTAACATCTTAGACATAAAACAGGGACCAAAAGAACCGTTCCAAAGCTATGTAG
ACAGGTTCTACAAAAGCTTGAGGGCAGAACAAACAGACCCAGCAGTAAAAAATTGGATGACCCAAACGCTGCTAATACAG
AATGCCAACCCAGACTGCAAGTTAGTACTAAAAGGACTGGGGATGAATCCCACCCTAGAAGAGATGCTAACCGCCTGCCA
GGGGGTAGGCGGACCAGGCCAGAAAGCCAGGCTAATGGCTGAAGCCCTAAAAGAGGCTATGGGACCAAGCCCTATCCCAT
TTGCAGCAGCCCAACAAAGAAAGGCAATTAGGTATTGGAACTGTGGAAAGGAGGGACACTCGGCAAGACAGTGCCGAGCA
CCTAGAAGACAGGGCTGCTGGAAGTGTGGCAAGCCAGGACACATCATGGCAAACTGCCCGGAAAGACAGGCAGGTTTTTT
AGGGTTGGGCCCACGGGGAAAGAAGCCTCGCAACTTCCCCGTGACCCAAGCCCCTCAGGGGCTGATACCAACAGCACCTC
CGGCAGATCCAGCAGCGGAACTGTTGGAGAGATATATGCAGCAAGGGAGAAAGCAGAGGGAGCAGAGGGAGAGACCATAC
AAAGAGGTGACGGAGGACTTGCTGCACCTCGAGCAGAGAGAGACACCTCACAGAGAGGAGACAGAGGACTTGCTGCACCT
CAATTCTCTCTTTGGAAAAGACCAGTAGTCACAGCGTACATCGAGGATCAGCCGGTAGAAGTCTTACTAGACACAGGGGC
TGATGACTCAATAGTAGCAGGAATAGAATTAGGGGACAATTACACTCCAAAAATAGTAGGGGGAATAGGGGGATTTATAA
ACACCAAAGAATACAAAAATGTAGAAATAAAAGTACTAAATAAAAGAGTAAGAGCCACCATAATGACAGGAGATACCCCA
ATCAACATCTTTGGCAGAAATATTCTGACAGCCTTAGGCATGTCATTAAATTTACCAGTTGCCAAGATAGAGCCAATAAA
AGTAACATTGAAGCCAGGGAAAGATGGACCAAGGCTGAAACAATGGCCCCTAACAAAAGAGAAAATAGAAGCACTAAAAG
AGATCTGTGAAAAAATGGAAAAAGAGGGCCAGCTAGAAGAGGCACCTCCAACTAATCCTTATAATACCCCCACATTTGCA
ATTAAGAAAAAGGACAAGAACAAATGGAGGATGCTGATAGATTTTAGAGAACTAAATAAGGTGACTCAAGATTTCACAGA
AATTCAGCTAGGAATTCCACACCCGGCAGGACTAGCCAAAAAGAAAAGGATCTCTATATTAGATGTAGGGGATGCCTATT
TTTCCATACCACTACATGAAGATTTTAGGCAGTATACTGCATTTACCCTACCAGCAGTAAACAATATGGAACCAGGAAAA
AGATATATATATAAAGTCTTGCCACAAGGATGGAAGGGATCACCAGCAATTTTTCAATACACAATGAGGCAAGTCTTAGA
ACCTTTCAGAAAAGCAAACCCAGATGTCATTCTCATCCAGTACATGGATGATATCTTAATAGCTAGTGACAGGACAGGTT
TAGAGCATGACAAAGTGGTCCTGCAGCTAAAAGAACTTCTAAATGGCCTAGGGTTTTCTACTCCAGATGAGAAGTTCCAA
AAAGACCCTCCATTTCAATGGATGGGCTGTGAACTATGGCCAACTAAATGGAAGCTGCAGAAACTACAACTGCCCCAGAA
AGACATATGGACAGTCAATGACATCCAAAAGCTAGTGGGAGTCTTAAATTGGGCGGCACAAATCTATTCAGGAATAAAAA
CCAAACACTTATGTAGACTAATTAGAGGAAAAATGACACTCACAGAAGAAGTGCAGTGGACAGAACTAGCAGAAGCAGAG
CTAGAAGAAAACAAAATTATCTTGAGCCAGGAACAAGAAGGATATTATTACCAAGAAGAAAAAGAATTAGAGGCAACAAT
CCAAAAAAGCCAAGGACATCAATGGACATACAAAATACACCAGGAAGAGAAAATCCTAAAAGTAGGAAAGTATGCAAAGA
TAAAAAATACCCATACCAATGGGGTCAGATTACTAGCACAGGTAGTTCAGAAAATAGGAAAAGAGGCACTAGTCATTTGG
GGACGGATACCAAAATTTCACCTGCCAGTGGAGAGAGAGACCTGGGAGCAGTGGTGGGATAACTACTGGCAAGTGACATG
GATCCCAGAGTGGGACTTTGTATCTACCCCACCACTGGTCAGGTTAACATTTAACCTAGTAGGAGATCCTATACCAGGCG
CAGAGACCTTCTACACAGATGGATCATGCAATAGACAGTCAAAAGAGGGAAAAGCAGGATATGTAACAGATAGAGGAAAA
GACAAAGTAAAAGTATTAGAACAAACTACCAATCAGCAGGCAGAATTAGAAGTCTTTCGGATGGCACTGGCAGACTCAGG
CCCAAAGGTTAATATCATAGTAGATTCACAGTATGTAATGGGGATAGTAGCAGGCCAGCCAACAGAGTCAGAAAATAGAA
TAGTGAACCAGATCATAGAAGAAATGATAAAGAAGGAAGCAGTCTATGTTGCATGGGTCCCAGCCCATAAAGGCATAGGA
GGAAACCAGGAAGTAGACCATTTAGTAAGTCAAGGCATCAGACAAGTATTATTCCTGGAAAAGATAGAGCCCGCTCAAGA
GGAACATGAAAAATATCATAGCATTATAAAAGAACTAACCCATAAATTTGGAATACCCCTTCTAGTAGCAAGACAGATAG
TAAACTCATGTGCCCAATGCCAACAGAAAGGAGAAGCCATACATGGGCAAGTAAATGCAGAAATAGGCGTTTGGCAAATG
GACTACACACACTTAGAAGGAAAAATCATTATAGTAGCAGTACATGTTGCAAGTGGATTCATAGAAGCAGAAGTCATCCC
ACAGGAATCAGGAAGGCAGACAGCACTCTTCCTATTAAAACTGGCCAGTAGGTGGCCAATAACGCACTTGCACACAGACA
ATGGCCCCAACTTCACTTCACAGGAAGTGAAGATGGTGGCATGGTGGGTAGGTATAGAACAATCCTTTGGAGTACCTTAC
AACCCACAAAGCCAGGGAGTAGTAGAAGCAATGAATCACCACCTAAAGAATCAGATAAGTAGAATTAGAGAACAGGCAAA
TACAATAGAAACAATAGTACTGATGGCAGTTCATTGCATGAATTTTAAAAGAAGGGGAGGAATAGGGGATATGACCCCAG
CAGAAAGACTAATCAACATGATTACCACAGAACAAGAAATACAATTCCTCCAAAGAAAAAATTCAAATTTTAAAAATTTC
CAGGTCTATTACAGAGAAGGCAGAGATCAGCTGTGGAAAGGACCTGGTGAACTACTGTGGAAGGGAGAAGGAGCAGTCAT
AGTCAAGGTAGGGACAGACATAAAAGTAGTACCAAGAAGGAAGGCCAAGATTATCAGGGACTATGGAGGAAGACAGGAAC
TGGATAGTAGTCCCCACCTGGAGGGTGCCAGGGAGGATGGAGAAATGGCATGCCCTTGTCAAGTACCTGAAATACAGAAC
AAAAGACCTAGAGGAGGTGCGCTATGTTCCCCACCACAAGGTGGGATGGGCATGGTGGACTTGCAGCAGGGTAATATTCC
CACTACAAGGAAAAAGTCATCTAGAAATACAGGCATATTGGAACCTAACACCAGAAAAAGGATGGCTCTCCTCTCATGCA
GTAAGATTAACCTGGTATACAGAAAAGTTCTGGACAGATGTTACCCCAGACTGTGCAGACATCCTAATACATAGCACTTA
TTTCTCTTGCTTTACGGCAGGTGAAGTAAGAAGAGCCATCAGAGGGGAAAAGTTATTGTCCTGCTGCAACTATCCCCAAG
CTCATAAAGCACAGGTACCATCACTTCAATACCTAGCCCTAGTAGTAGTACAACAAAATGACAGACCCCAGAGAAAGGGT
ACCGCCAGGAAACAGTGGAGAAGAGACCATTGGAGAGGCCTTCGAGTGGCTAGAGAGGACCATAGAAGCCTTAAACAGGG
AGGCAGTGAACCATCTGCCCCGAGAGCTCATTTTCCAGGTGTGGCAAAGGTCCTGGAGATATTGGCATGATGAACAAGGG
ATGTCAGCAAGCTACACAAAGTATAGATATTTGTGCCTAATGCAAAAAGCTATATTTACACATTTCAAGAGAGGGTGCAC
TTGCTGGGGGGAGGACATGGGCCGGGAAGGATTGGAAGACCAAGGACCTCCCCCTCCTCCCCCTCCAGGTCTAGTCTAAT
GACTGAAGCACCAACAGAGTTTCCCCCAGAAGATGGGACCCCACGGAGGGACTTAGGGAGTGACTGGGTAATAGAAACTC
TGAGGGAAATAAAGGAAGAAGCCTTAAGACATTTTGATCCCCGCTTGCTAATTGCTCTTGGCTACTATATCCATAATAGA
CATGGAGACACCCTTGAAGGCGCCAGAGAGCTCATTAAAACCCTACAACGAGCCCTCTTCGTGCACTTCAGAGCGGGATG
TAACCGCTCAAGAATTGGCTAAACAAGGAGAAGAACTCCTTGCCCAGCTGCACCGACCCCTAGAGCCATGCACTAACAAA
TGCTATTGTAAGCGATGCAGTTTCCATTGCCAGCTGTGTTTCTCGAAAAAGGGGCTCGGAATATCATATGAGCGAAAGGG
CAGACGAAGAAGGACTCCAAGGAAAACTAAGACTCCTTCGCCTTCTGCACCAGACAAGTGAGTATGGAGCCTGGTAGGAA
TCAGCTGTTTGTTGTCATTTTACTAACAAGTGCTTGCTTAGTATATTGTAGCCAGTATGTGACTGTTTTCTATGGCATAC
CCGCGTGGAAAAATGCATCTATTCCCTTATTTTGTGCAACTAAAAATAGAGACACTTGGGGGACCATACAGTGCTTGCCA
GACAATGATGATTATCAGGAAATAATTTTAAATGTGACAGAGGCTTTTGATGCATGGAATAATACAGTGACAGAACAAGC
AGTAGAAGATGTCTGGCATCTATTTGAGACATCAATAAAACCATGTGTCAAGCTAACACCTCTATGTGTGGCAATGAATT
GTAGCAGGGTTCAAGGGAATACCACGACCCCGAATCCCAGGACCTCGAGTTCCACAACCTCGAGACCACCCACATCCGCA
GCCTCCATAATAAATGAAACTTCTAACTGCATAGAAAACAACACATGCGCAGGATTAGGGTATGAGGAGATGATGCAATG
TGAGTTCAATATGAAGGGGTTAGAACAAGATAAGAAAAGGAGGTATAAGGACACATGGTATTTAGAAGATGTGGTTTGTG
ACAACACAACAGCTGGCACATGTTACATGAGACATTGCAACACATCAATCATCAAAGAGTCATGTGATAAGCACTATTGG
GATGCTATGAGGTTTAGATACTGTGCACCACCGGGCTTTGCCCTATTAAGATGTAATGATACCAACTATTCAGGCTTTGA
ACCTAAGTGCACTAAAGTAGTAGCTGCTTCATGCACAAGGATGATGGAAACGCAAACTTCTACTTGGTTTGGCTTTAATG
GCACTAGAGCAGAAAATAGAACATATATCTATTGGCATGGCAGAGATAATAGGACTATCATTAGCTTAAACAAGTATTAT
AATCTCACAATGCGTTGTAAGAGACCAGGAAATAAGACAGTTTTACCAATAACACTTATGTCAGGATTAGTGTTTCACTC
TCAGCCAATCAACACAAGGCCTAGGCAGGCATGGTGCCGGTTTGGAGGCAGATGGAGGGAAGCCATGCAGGAGGTGAAGC
AAACCCTTGTACAACATCCCAGATACAAAGGAATCAATGATACAGGGAAAATTAACTTTACGAAACCGGGAGCAGGCTCA
GACCCGGAAGTGGCATTTATGTGGACTAACTGCAGAGGAGAATTTCTCTACTGTAACATGACTTGGTTCCTCAATTGGGT
AGAAGACAAGAACCAAACACGGCGCAACTATTGCCATATAAAGCAGATAATTAATACCTGGCATAAAGTAGGGAAAAATG
TATATTTGCCTCCTAGGGAAGGGGAGTTGGCCTGTGAATCAACAGTAACCAGCATAATTGCTAACATTGACATAGATAAA
AATCGGACTCATACCAACATTACCTTTAGTGCAGAAGTGGCAGAACTGTACCGATTAGAACTGGGAGACTACAAATTAAT
AGAAATAACACCAATTGGCTTCGCACCTACAGATCAGAGAAGGTACTCCTCAACTCCAGTGAGGAACAAAAGAGGTGTGT
TCGTGCTAGGGTTCTTGGGTTTTCTCGCGACAGCAGGTTCTGCAATGGGCGCGCGGTCCCTGACGCTGTCAGCCCAGTCC
CGGACTTTACTGGCCGGGATAGTGCAGCAACAGCAACAGCTGTTGGACGTAGTCAAGAGACAACAAGAAATGTTGCGACT
GACCGTCTGGGGAACGAAAAACCTCCAGGCAAGAGTCACTGCTATCGAGAAGTACCTAAAGCATCAGGCACAGCTAAATT
CATGGGGATGTGCGTTTAGACAGGTCTGCCACACTACTGTACCGTGGGTAAATGACTCTTTATCGCCTGACTGGAAAAAT
ATGACATGGCAGGAGTGGGAGAAACAAGTCCGCTACCTAGAGGCAAATATCAGTCAAAGTTTAGAAGAAGCCCAAATTCA
ACAAGAAAAGAATATGTATGAATTACAAAAATTAAATAGCTGGGATATTCTTGGCAACTGGTTTGACTTAACCTCCTGGG
TCAAGTATATTCAATATGGAGTGCATATAGTAGTGGGAATAATAGCTTTAAGAATAGCAATCTATGTAGTGCAATTGTTA
AGTAGATTTAGAAAGGGCTATAGGCCTGTTTTCTCTTCCCCCCCCGGTTATCTCCAACAGATCCATATCCACAAGGACCG
GGGACAGCCAGCCAACGAAGGAACAGAAGAAGACGTCGGAGGCGACAGTGGTTACGACTTGTGGCCTTGGCCAATAAACT
ATGTGCAGTTCCTGATCCACCTACTGACTCGCCTCTTGATCGGGCTATACAACATCTGCAGAGACTTACTATCCAAGAAC
TCCCCGACCCGCCGACTGATCTCCCAGAGTCTAACAGCAATCAGGGACTGGCTGAGACTTAAGGCGGCCCAACTGCAATA
TGGGTGCGAGTGGATCCAAGAAGCTTTCCAAGCATTCGCGAGGACTACGAGAGAGACTCTTGCGGGCGCGTGGGGATGGT
TATGGGAAGCAGCGCGACGCATCGGGAGGGGAATACTCGCAGTTCCAAGAAGAATCAGGCAGGGAGCAGAACTCGCCCTC
CTGTGAGGGACAGCAGTATCAGCAGGGAGAGTACATGAACAGCCCATGGAGAAACCCAGCAACAGAAAGACAGAAAGATT
TGTATAGGCAGCAAAATATGGATGATGTAGATTCTGATGATGATGACCTAATAGGAGTTCCTGTTACACCAAGAGTACCA
CGGAGAGAAATGACCTATAAATTGGCAATAGATATGTCACATTTTATAAAAGAAAAAGGGGGACTGCAAGGGATGTTTTA
CAGTAGGAGGAGACATAGAATCCTAGACATATACCTAGAAAAAGAGGAAGGGATAATACCAGATTGGCAGAATTATACTC
ATGGGCCAGGAGTAAGGTACCCAATGTACTTCGGGTGGCTGTGGAAGCTAGTATCAGTAGAACTCTCACAAGAGGCAGAG
GAAGATGAGGCCAACTGCTTAGTACACCCAGCACAAACAAGCAGACATGATGATGAGCATGGGGAGACATTAGTGTGGCA
GTTTGACTCCATGCTGGCCTATAACTACAAGGCCTTCACTCTGTACCCAGAAGAGTTTGGGCACAAGTCAGGATTGCCAG
AGAAAGAATGGAAGGCAAAACTGAAAGCAAGAGGGATACCATATAGTGAATAACAGGAACAACCATACTTGGTCAAGGCA
GGAAGTAGCTACTAAGAAACAGCTGAGGCTGCAGGGACTTTCCAGAAGGGGCTGTAACCAAGGGAGGGACATGGGAGGAG
CTGGTGGGGAACGCCCTCATACTTACTGTATAAATGTACCCGCTTCTTGCATTGTATTCAGTCGCTCTGCGGAGAGGCTG
GCAGATCGAGCCCTGAGAGGTTCTCTCCAGCACTAGCAGGTAGAGCCTGGGTGTTCCCTGCTGGACTCTCACCAGTACTT
GGCCGGTACTGGGCAGACGGCTCCACGCTTGCTTGCTTAAAGACCTCTTCAATAAAGCTGCCAGTTAGAAGCAAGTTAAG
TGTGTGTTCCCATCTCTCCTAGTCGCCGCCTGGTCATTCGGTGTTCATCTGAGTAACAAGACCCTGGTCTGTTAGGACCC
TTCTCGCTTTGGGAATCCAAGGCAGGAAAATCCCTAGCA